CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo5g002860
(
Brassica oleracea
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bo5g002860
T292393_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo5g002860.1
NAC/NAM
4
137
KPGFEFRPYDEELVGFYLRQKLLGNHSLVDGVIRDIKICSLDPWDLRFQSKIKSRDPFWYFLSRIENSGGRQSRTTPSGSWKLTGDPVYVNDRWGNLTGFRGKIGYKRVLTFSKGKSSSSSSSISEWVMHELHY
Links
Other
NAC/NAM
family TFs
Other
Brassica oleracea
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra033296
Brassica rapa
Bra033296
I
0.988
Thhalv10007665m.g
Eutrema salsugineum
Thhalv10007665m.g
I
0.951
Cagra.1968s0045
Capsella grandiflora
Cagra.1968s0045
I
0.945
Carubv10009049m.g
Capsella rubella
Carubv10009049m.g
I
0.945
ANAC001
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1000119
I
0.940
Bostr.5325s0009
Boechera stricta
Bostr.5325s0009
I
0.938
Bo5g002850
Brassica oleracea
Bo5g002850
I
0.936
Bostr.5325s0019
Boechera stricta
Bostr.5325s0019
I
0.934
MTR_8g023860
Medicago truncatula
MTR_8g023860
I
0.932
Carubv10009451m.g
Capsella rubella
Carubv10009451m.g
I
0.931
MTR_8g023930
Medicago truncatula
MTR_8g023930
I
0.918
Bostr.5325s0011
Boechera stricta
Bostr.5325s0011
I
0.913
Bo9g004070
Brassica oleracea
Bo9g004070
I
0.904
MTR_8g023840
Medicago truncatula
MTR_8g023840
I
0.903
Bo5g002810
Brassica oleracea
Bo5g002810
I
0.902
Ca_20988
Cicer arietinum
Ca_20988
I
0.902
Lus10005143.g
Linum usitatissimum
Lus10005143.g
N
0.900
Lus10030175.g
Linum usitatissimum
Lus10030175.g
N
0.900
Bo5g002830
Brassica oleracea
Bo5g002830
N
0.898
MTR_8g023880
Medicago truncatula
MTR_8g023880
N
0.897
TCM_015535
Theobroma cacao
TCM_015535
I
0.897
Gorai.006G203800
Gossypium raimondii
Gorai.006G203800
I
0.897
Lus10015587.g
Linum usitatissimum
Lus10015587.g
I
0.897
Lus10032919.g
Linum usitatissimum
Lus10032919.g
I
0.897
Bra036328
Brassica rapa
Bra036328
I
0.892
Sb10g000101
Sorghum bicolor
Sb10g000101
N
0.882
GRMZM2G163914
Zea mays
GRMZM2G163914
N
0.880
Si006105m.g
Setaria italica
Si006105m.g
N
0.879
Solyc08g074300.2
Solanum lycopersicum
Solyc08g074300.2
I
0.879
Pm028711
Prunus mume
Pm028711
I
0.874
Gorai.007G017500
Gossypium raimondii
Gorai.007G017500
I
0.874
PGSC0003DMG400029593
Solanum tuberosum
PGSC0003DMG400029593
I
0.873
AMTR_s00018p00071850
Amborella trichopoda
AMTR_s00018p00071850
I
0.872
MLOC_75297
Hordeum vulgare
MLOC_75297
N
0.872
Traes_4AL_22CE41C6F
Triticum aestivum
Traes_4AL_22CE41C6F
N
0.872
PRUPE_ppa022384mg
Prunus persica
PRUPE_ppa022384mg
I
0.871