CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo5g132990
(
Brassica oleracea
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bo5g132990
T292416_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo5g132990.1
NAC/NAM
19
143
PPGFRFHPRDDELVCDYLMKRNVRSRYQPVVLIEVDLNKCEPWDIPQSARVGGKEWYFYSQKDRKYATGQRTNRATAIGYWKATGKDRAIQRNGSLVGMRKTLVFYIGRAPKGRKTDWVMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Brassica oleracea
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra034713
Brassica rapa
Bra034713
N
0.993
Thhalv10021297m.g
Eutrema salsugineum
Thhalv10021297m.g
N
0.991
Bo3g065240
Brassica oleracea
Bo3g065240
N
0.988
Bra001480
Brassica rapa
Bra001480
N
0.988
scaffold_301478.1
Arabidopsis lyrata
scaffold_301478.1
N
0.987
AT3G12977
Arabidopsis thaliana
AT3G12977
N
0.986
Bostr.3640s0073
Boechera stricta
Bostr.3640s0073
N
0.982
NAC1
Arabidopsis lyrata
Al_scaffold_0001_4992
N
0.958
Bo3g185760
Brassica oleracea
Bo3g185760
N
0.956
Bra030820
Brassica rapa
Bra030820
N
0.956
SapurV1A.0085s0410
Salix purpurea
SapurV1A.0085s0410
N
0.948
PGSC0003DMG400022134
Solanum tuberosum
PGSC0003DMG400022134
N
0.947
NAC021
Arabidopsis thaliana
AT1G56010
N
0.946
Ciclev10021117m.g
Citrus clementina
Ciclev10021117m.g
N
0.946
Thhalv10011659m.g
Eutrema salsugineum
Thhalv10011659m.g
N
0.944
29650.m000275
Ricinus communis
29650.m000275
N
0.936
OPUNC03G00610
Oryza punctata
OPUNC03G00610
N
0.927
Cla023574
Citrullus lanatus
Cla023574
N
0.922
Eucgr.F01449
Eucalyptus grandis
Eucgr.F01449
N
0.921
TCM_032479
Theobroma cacao
TCM_032479
N
0.918
GLYMA08G18470
Glycine max
GLYMA08G18470
N
0.916
OB03G10720
Oryza brachyantha
OB03G10720
N
0.908
OLONG_025732
Oryza longistaminata
OLONG_025732
I
0.902
MDP0000298182
Malus domestica
MDP0000298182
N
0.897
BGIOSGA011685
Oryza indica
BGIOSGA011685
I
0.896
cassava27052.m1
Manihot esculenta
cassava27052.m1
I
0.895
OBART03G00700
Oryza barthii
OBART03G00700
I
0.893
OGLUM03G00640
Oryza glumaepatula
OGLUM03G00640
I
0.893
ORGLA03G0005100
Oryza glaberrima
ORGLA03G0005100
I
0.893
Sb10g027100
Sorghum bicolor
Sb10g027100
N
0.892
PRUPE_ppa008801mg
Prunus persica
PRUPE_ppa008801mg
N
0.882
Ca_13537
Cicer arietinum
Ca_13537
N
0.881
evm.TU.supercontig_165.12
Carica papaya
evm.TU.supercontig_165.12
N
0.880
OGLUM02G24950
Oryza glumaepatula
OGLUM02G24950
N
0.875
OMERI02G24100
Oryza meridionalis
OMERI02G24100
N
0.875
ONIVA02G26880
Oryza nivara
ONIVA02G26880
N
0.875
ORUFI02G25930
Oryza rufipogon
ORUFI02G25930
N
0.875
LPERR02G20100
Leersia perrieri
LPERR02G20100
N
0.874
OLONG_000596
Oryza longistaminata
OLONG_000596
N
0.871