CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo8g054390
(
Brassica oleracea
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bo8g054390
T292460_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo8g054390.1
NAC/NAM
11
151
PPGFRFHPSDEELVCHYLCNKIRAKSLHCNVEDDDVDEALKDATDLVEIDLHICEPWQLPDVAKLNAKEWYFFSFRDRKYCTGYRTNRATVSGYWKATGKDRTVIDPRTRQLVGMRKTLVFYRNRAPHGIKTTWIMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Brassica oleracea
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra010362
Brassica rapa
Bra010362
N
0.998
anac074
Arabidopsis thaliana
AT4G28530
N
0.997
Bo1g017380
Brassica oleracea
Bo1g017380
N
0.997
Bo7g113180
Brassica oleracea
Bo7g113180
N
0.997
Bra011037
Brassica rapa
Bra011037
N
0.997
Bra024194
Brassica rapa
Bra024194
N
0.997
anac074
Arabidopsis lyrata
fgenesh2_kg.7__1345__AT4G28530.1
N
0.997
Bostr.7867s0694
Boechera stricta
Bostr.7867s0694
N
0.997
Cagra.1225s0038
Capsella grandiflora
Cagra.1225s0038
N
0.997
Carubv10005139m.g
Capsella rubella
Carubv10005139m.g
N
0.997
Thhalv10025606m.g
Eutrema salsugineum
Thhalv10025606m.g
N
0.997
gw1.77.154.1
Physcomitrella patens
gw1.77.154.1
N
0.960
Traes_2BL_260DF778A
Triticum aestivum
Traes_2BL_260DF778A
N
0.924
Gorai.001G254300
Gossypium raimondii
Gorai.001G254300
N
0.924
mgf009162m
Mimulus guttatus
mgf009162m
N
0.920
PK19051.1
Cannabis sativa
PK19051.1
N
0.920
Ciclev10021312m.g
Citrus clementina
Ciclev10021312m.g
N
0.919
TCM_003998
Theobroma cacao
TCM_003998
N
0.916
Solyc09g025310.2
Solanum lycopersicum
Solyc09g025310.2
N
0.909
MTR_1g069805
Medicago truncatula
MTR_1g069805
N
0.908
Ca_07743
Cicer arietinum
Ca_07743
N
0.908
SapurV1A.0006s0680
Salix purpurea
SapurV1A.0006s0680
N
0.906
GLYMA19G34881
Glycine max
GLYMA19G34881
N
0.905
GSMUA_AchrUn_randomG02760_001
Musa acuminata
GSMUA_AchrUn_randomG02760_001
N
0.902
PGSC0003DMG400010294
Solanum tuberosum
PGSC0003DMG400010294
N
0.902
SapurV1A.0233s0110
Salix purpurea
SapurV1A.0233s0110
N
0.902
GLYMA10G04350
Glycine max
GLYMA10G04350
N
0.901
GLYMA13G18620
Glycine max
GLYMA13G18620
N
0.901
Solyc06g008360.2
Solanum lycopersicum
Solyc06g008360.2
N
0.900
AMTR_s00046p00062600
Amborella trichopoda
AMTR_s00046p00062600
N
0.897
PGSC0003DMG400025505
Solanum tuberosum
PGSC0003DMG400025505
N
0.895
Aquca_017_00744
Aquilegia coerulea
Aquca_017_00744
N
0.895
cassava41082.m1
Manihot esculenta
cassava41082.m1
N
0.892
Gorai.001G178800
Gossypium raimondii
Gorai.001G178800
N
0.890
GSMUA_Achr1G10860_001
Musa acuminata
GSMUA_Achr1G10860_001
N
0.889
Pavir.J11268
Panicum virgatum
Pavir.J11268
N
0.888
Lus10022915.g
Linum usitatissimum
Lus10022915.g
N
0.887
MTR_7g097090
Medicago truncatula
MTR_7g097090
N
0.885
PRUPE_ppa009628mg
Prunus persica
PRUPE_ppa009628mg
N
0.884
Pm020580
Prunus mume
Pm020580
N
0.884
Gorai.004G221300
Gossypium raimondii
Gorai.004G221300
N
0.884
Gorai.007G147300
Gossypium raimondii
Gorai.007G147300
N
0.884
MDP0000697030
Malus domestica
MDP0000697030
N
0.884
GSMUA_Achr11G00880_001
Musa acuminata
GSMUA_Achr11G00880_001
N
0.883
PDK_20s1301681g003
Phoenix dactylifera
PDK_20s1301681g003
N
0.883
Eucgr.K03256
Eucalyptus grandis
Eucgr.K03256
N
0.882
Pavir.Ib03261
Panicum virgatum
Pavir.Ib03261
N
0.882
PGSC0003DMG400020147
Solanum tuberosum
PGSC0003DMG400020147
N
0.881
mgf018312m
Mimulus guttatus
mgf018312m
N
0.881
Lus10033905.g
Linum usitatissimum
Lus10033905.g
N
0.880
gene08112-v1.0-hybrid
Fragaria vesca
gene08112-v1.0-hybrid
N
0.878
GSMUA_Achr8G18980_001
Musa acuminata
GSMUA_Achr8G18980_001
N
0.876
Si036835m.g
Setaria italica
Si036835m.g
N
0.875