CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bo9g024360
(
Brassica oleracea
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bo9g024360
T292478_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo9g024360.1
NAC/NAM
7
134
LPGFRFHPTEEELTDYYLKNMVCGKFSKVEVIGFLNIYRHDPWDLPRLSKIGEREWYFFVPRERKHGNGGRPSRTTEKGYWKATGSDRKIISLSEPKRVIGLKKTLVFYRGRAPGGSKTDWVMNEYRM
Links
Other
NAC/NAM
family TFs
Other
Brassica oleracea
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra037283
Brassica rapa
Bra037283
N
0.995
Cla007018
Citrullus lanatus
Cla007018
N
0.974
Cucsa.119310
Cucumis sativus
Cucsa.119310
N
0.971
POPTR_0005s10610
Populus trichocarpa
POPTR_0005s10610
I
0.964
SapurV1A.0958s0170
Salix purpurea
SapurV1A.0958s0170
I
0.963
cassava23439.valid.m1
Manihot esculenta
cassava23439.valid.m1
I
0.962
PK05686.1
Cannabis sativa
PK05686.1
I
0.952
BRADI3G13630
Brachypodium distachyon
BRADI3G13630
N
0.924
Cagra.7865s0013
Capsella grandiflora
Cagra.7865s0013
I
0.921
Carubv10011108m.g
Capsella rubella
Carubv10011108m.g
I
0.914
anac036
Arabidopsis thaliana
AT2G17040
N
0.910
anac036
Arabidopsis lyrata
fgenesh2_kg.3__3291__AT2G17040.1
N
0.910
TCM_006499
Theobroma cacao
TCM_006499
N
0.904
TRIUR3_18561
Triticum urartu
TRIUR3_18561
I
0.904
Pavir.J38855
Panicum virgatum
Pavir.J38855
I
0.899
evm.TU.supercontig_320.2
Carica papaya
evm.TU.supercontig_320.2
N
0.896
MDP0000480581
Malus domestica
MDP0000480581
N
0.893
MDP0000868556
Malus domestica
MDP0000868556
N
0.893
Bo3g092020
Brassica oleracea
Bo3g092020
N
0.890
Bo7g015050
Brassica oleracea
Bo7g015050
N
0.890
Bra013034
Brassica rapa
Bra013034
N
0.890
Gorai.008G038800
Gossypium raimondii
Gorai.008G038800
N
0.890
Eucgr.I01494
Eucalyptus grandis
Eucgr.I01494
N
0.882
GSMUA_Achr11G16860_001
Musa acuminata
GSMUA_Achr11G16860_001
I
0.875
PRUPE_ppa009455mg
Prunus persica
PRUPE_ppa009455mg
N
0.875
Pm020961
Prunus mume
Pm020961
N
0.875
SapurV1A.0059s0580
Salix purpurea
SapurV1A.0059s0580
I
0.874
Thhalv10022800m.g
Eutrema salsugineum
Thhalv10022800m.g
N
0.874
Cagra.0805s0005
Capsella grandiflora
Cagra.0805s0005
N
0.873
Carubv10014350m.g
Capsella rubella
Carubv10014350m.g
N
0.873