CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra001480
(
Brassica rapa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bra001480
T292511_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra001480.1-P
NAC/NAM
19
143
PPGFRFHPRDDELVCDYLMKRTVRSLYQPVVLIEVDLNKCEPWDIPQTARVGCKEWYFYSQKDLKYATGQRTNRATATGYWKATGKDRSIHRNGSLVGMRKTLVFYKGRAPKGRKTDWVMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Brassica rapa
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo3g065240
Brassica oleracea
Bo3g065240
N
0.994
Bra034713
Brassica rapa
Bra034713
N
0.989
Bo5g132990
Brassica oleracea
Bo5g132990
N
0.988
Thhalv10021297m.g
Eutrema salsugineum
Thhalv10021297m.g
N
0.988
scaffold_301478.1
Arabidopsis lyrata
scaffold_301478.1
N
0.983
Bostr.3640s0073
Boechera stricta
Bostr.3640s0073
N
0.983
AT3G12977
Arabidopsis thaliana
AT3G12977
N
0.982
NAC1
Arabidopsis lyrata
Al_scaffold_0001_4992
N
0.942
Bra030820
Brassica rapa
Bra030820
N
0.942
SapurV1A.0085s0410
Salix purpurea
SapurV1A.0085s0410
N
0.942
NAC021
Arabidopsis thaliana
AT1G56010
N
0.939
Bo3g185760
Brassica oleracea
Bo3g185760
N
0.938
Ciclev10021117m.g
Citrus clementina
Ciclev10021117m.g
N
0.930
PGSC0003DMG400022134
Solanum tuberosum
PGSC0003DMG400022134
N
0.928
29650.m000275
Ricinus communis
29650.m000275
N
0.928
Thhalv10011659m.g
Eutrema salsugineum
Thhalv10011659m.g
N
0.923
OPUNC03G00610
Oryza punctata
OPUNC03G00610
N
0.919
Cla023574
Citrullus lanatus
Cla023574
N
0.907
GLYMA08G18470
Glycine max
GLYMA08G18470
N
0.906
OLONG_025732
Oryza longistaminata
OLONG_025732
I
0.905
BGIOSGA011685
Oryza indica
BGIOSGA011685
I
0.900
OBART03G00700
Oryza barthii
OBART03G00700
I
0.897
OGLUM03G00640
Oryza glumaepatula
OGLUM03G00640
I
0.897
ORGLA03G0005100
Oryza glaberrima
ORGLA03G0005100
I
0.897
Eucgr.F01449
Eucalyptus grandis
Eucgr.F01449
N
0.896
OGLUM02G24950
Oryza glumaepatula
OGLUM02G24950
N
0.894
OMERI02G24100
Oryza meridionalis
OMERI02G24100
N
0.894
ONIVA02G26880
Oryza nivara
ONIVA02G26880
N
0.894
TCM_032479
Theobroma cacao
TCM_032479
N
0.894
LPERR02G20100
Leersia perrieri
LPERR02G20100
N
0.893
OB03G10720
Oryza brachyantha
OB03G10720
N
0.892
MDP0000298182
Malus domestica
MDP0000298182
N
0.892
ORUFI02G25930
Oryza rufipogon
ORUFI02G25930
N
0.891
OLONG_000596
Oryza longistaminata
OLONG_000596
N
0.890
evm.TU.supercontig_165.12
Carica papaya
evm.TU.supercontig_165.12
N
0.889
OBART02G24560
Oryza barthii
OBART02G24560
N
0.887
OB02G31950
Oryza brachyantha
OB02G31950
N
0.879
cassava27052.m1
Manihot esculenta
cassava27052.m1
I
0.878
Sb10g027100
Sorghum bicolor
Sb10g027100
N
0.874