CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra008567
(
Brassica rapa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bra008567
T292557_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC045
M07194_2.00
Arabidopsis thaliana
TTNCTTSHNNNDCAMG
CKTGHNNNDSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC045_col_a
0.948
0.886
NAC045
M07195_2.00
Arabidopsis thaliana
TTNCTTSHNNNDCAMG
CKTGHNNNDSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC045_colamp_a
0.948
0.886
PK19314.1
M01291_2.00
Cannabis sativa
NNNNAMDNHW
WDNHKTNNNN
PBM
Lambert et al.(2019)
pTH11252
0.936
0.841
anac057
M07208_2.00
Arabidopsis thaliana
TNCKTGHNNNDCAMGYH
DRCKTGHNNNDCAMGNA
Dap-seq
OMalley et al.(2016)
ANAC057_col_a
0.928
0.784
anac057
M07209_2.00
Arabidopsis thaliana
WNCKTGHNNHDCAMGYHAYCD
HGRTDRCKTGHDNNDCAMGNW
Dap-seq
OMalley et al.(2016)
ANAC057_colamp_a
0.928
0.784
anac028
M01289_2.00
Arabidopsis thaliana
NTTGCGTRH
DYACGCAAN
PBM
Lambert et al.(2019)
pTH9962
0.919
0.818
anac028
M07179_2.00
Arabidopsis thaliana
CTTSHNNHDCAMGYWA
TWRCKTGHDNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC028_col_a
0.919
0.818
PK26618.1
M01292_2.00
Cannabis sativa
NNYAMGHHA
TDDCKTRNN
PBM
Lambert et al.(2019)
pTH11328
0.905
0.773
ANAC020
M07178_2.00
Arabidopsis thaliana
TTNCKTGHNNNDCAMGYHAHY
RDTDRCKTGHNNNDCAMGNAA
Dap-seq
OMalley et al.(2016)
ANAC020_col_v31
0.895
0.727
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra008567.1-P
NAC/NAM
7
128
PPGFRFHPTDEELITYYLKRKINSREIELEIIPEVDLYKCEPWDLPGKSLLPSKDQEWYFFSPRDRKYPNGSRTNRATKGGYWKATGKDRRDAYALCRVFKKIIIEGKPRDQHQQHHQPYAH
Links
Other
NAC/NAM
family TFs
Other
Brassica rapa
TFs
196 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANAC020
Arabidopsis thaliana
AT1G54330
D
0.895
anac028
Arabidopsis thaliana
AT1G65910
D
0.919
NAC045
Arabidopsis thaliana
AT3G03200
D
0.948
anac057
Arabidopsis thaliana
AT3G17730
D
0.928
PK19314.1
Cannabis sativa
PK19314.1
D
0.936
PK26618.1
Cannabis sativa
PK26618.1
D
0.905
AC233865.1_FG003
Zea mays
AC233865.1_FG003
I
0.921
anac028
Arabidopsis lyrata
Al_scaffold_0002_1137
I
0.919
anac057
Arabidopsis lyrata
Al_scaffold_0003_1866
I
0.928
anac045
Arabidopsis lyrata
Al_scaffold_0003_260
I
0.948
AMTR_s00037p00144010
Amborella trichopoda
AMTR_s00037p00144010
I
0.914
AMTR_s00044p00058960
Amborella trichopoda
AMTR_s00044p00058960
I
0.912
AMTR_s00149p00068500
Amborella trichopoda
AMTR_s00149p00068500
I
0.877
NAC086
Arabidopsis thaliana
AT5G17260
I
0.943
BGIOSGA011734
Oryza indica
BGIOSGA011734
I
0.932
BGIOSGA031229
Oryza indica
BGIOSGA031229
I
0.921
Bo1g154830
Brassica oleracea
Bo1g154830
I
0.948
Bo2g052630
Brassica oleracea
Bo2g052630
I
0.916
Bo3g012450
Brassica oleracea
Bo3g012450
I
0.952
Bo3g185870
Brassica oleracea
Bo3g185870
I
0.892
Bo5g122710
Brassica oleracea
Bo5g122710
I
0.928
Bo5g150170
Brassica oleracea
Bo5g150170
I
0.948
Bo6g036040
Brassica oleracea
Bo6g036040
I
0.901
Bo9g161440
Brassica oleracea
Bo9g161440
I
0.960
Bra003335
Brassica rapa
Bra003335
I
0.902
Bra006392
Brassica rapa
Bra006392
I
0.952
Bra021366
Brassica rapa
Bra021366
I
0.948
Bra022236
Brassica rapa
Bra022236
I
0.928
Bra030807
Brassica rapa
Bra030807
I
0.892
Bra032009
Brassica rapa
Bra032009
I
0.948
Bra039745
Brassica rapa
Bra039745
I
0.916
BRADI1G77217
Brachypodium distachyon
BRADI1G77217
I
0.932
F775_13960
Aegilops tauschii
F775_13960
I
0.892
F775_22879
Aegilops tauschii
F775_22879
I
0.939
ANAC020
Arabidopsis lyrata
fgenesh2_kg.1__4648__AT1G54330.1
I
0.892
anac086
Arabidopsis lyrata
fgenesh2_kg.6__1724__AT5G17260.1
I
0.956
GLYMA02G40750
Glycine max
GLYMA02G40750
I
0.936
GLYMA08G17351
Glycine max
GLYMA08G17351
I
0.900
GLYMA09G29760
Glycine max
GLYMA09G29760
I
0.924
GLYMA11G33210
Glycine max
GLYMA11G33210
I
0.936
GLYMA14G39080
Glycine max
GLYMA14G39080
I
0.936
GLYMA15G41825
Glycine max
GLYMA15G41825
I
0.896
GLYMA16G34310
Glycine max
GLYMA16G34310
I
0.924
GLYMA18G05020
Glycine max
GLYMA18G05020
I
0.928
GRMZM2G174070
Zea mays
GRMZM2G174070
I
0.943
GRMZM2G406204
Zea mays
GRMZM2G406204
I
0.943
GSMUA_Achr11G01400_001
Musa acuminata
GSMUA_Achr11G01400_001
I
0.888
GSMUA_Achr1G02820_001
Musa acuminata
GSMUA_Achr1G02820_001
I
0.926
GSMUA_Achr3G13880_001
Musa acuminata
GSMUA_Achr3G13880_001
I
0.921
GSMUA_Achr8G13430_001
Musa acuminata
GSMUA_Achr8G13430_001
I
0.937
GSMUA_Achr9G23940_001
Musa acuminata
GSMUA_Achr9G23940_001
I
0.928
GSMUA_AchrUn_randomG08190_001
Musa acuminata
GSMUA_AchrUn_randomG08190_001
I
0.927
LPERR03G01480
Leersia perrieri
LPERR03G01480
I
0.932
LPERR09G14740
Leersia perrieri
LPERR09G14740
I
0.921
MLOC_37843
Hordeum vulgare
MLOC_37843
I
0.875
MLOC_37844
Hordeum vulgare
MLOC_37844
I
0.892
MLOC_71128
Hordeum vulgare
MLOC_71128
I
0.939
MTR_2g064090
Medicago truncatula
MTR_2g064090
I
0.898
MTR_3g064580
Medicago truncatula
MTR_3g064580
I
0.935
MTR_5g076850
Medicago truncatula
MTR_5g076850
I
0.922
MTR_6g477900
Medicago truncatula
MTR_6g477900
I
0.910
OB03G11530
Oryza brachyantha
OB03G11530
I
0.932
OB09G25570
Oryza brachyantha
OB09G25570
I
0.920
OBART03G01580
Oryza barthii
OBART03G01580
I
0.932
OGLUM03G01540
Oryza glumaepatula
OGLUM03G01540
I
0.932
OGLUM09G19470
Oryza glumaepatula
OGLUM09G19470
I
0.921
OLONG_013792
Oryza longistaminata
OLONG_013792
I
0.932
OMERI03G01540
Oryza meridionalis
OMERI03G01540
I
0.932
OMERI09G14160
Oryza meridionalis
OMERI09G14160
I
0.921
ONIVA09G11670
Oryza nivara
ONIVA09G11670
I
0.932
ONIVA09G20110
Oryza nivara
ONIVA09G20110
I
0.921
OPUNC03G01460
Oryza punctata
OPUNC03G01460
I
0.932
ORGLA03G0013500
Oryza glaberrima
ORGLA03G0013500
I
0.932
ORGLA09G0151700
Oryza glaberrima
ORGLA09G0151700
I
0.921
ORUFI03G01320
Oryza rufipogon
ORUFI03G01320
I
0.932
OS03G0119966
Oryza sativa
OS03G0119966
I
0.932
OS09G0552800
Oryza sativa
OS09G0552800
I
0.921
PGSC0003DMG400021474
Solanum tuberosum
PGSC0003DMG400021474
I
0.919
PGSC0003DMG400031054
Solanum tuberosum
PGSC0003DMG400031054
I
0.925
POPTR_0004s07910
Populus trichocarpa
POPTR_0004s07910
I
0.930
ANAC020
Populus trichocarpa
POPTR_0008s08100
I
0.902
POPTR_0010s18180
Populus trichocarpa
POPTR_0010s18180
I
0.909
anac057
Populus trichocarpa
POPTR_0012s03510
I
0.939
POPTR_0015s05450
Populus trichocarpa
POPTR_0015s05450
I
0.936
POPTR_0017s02020
Populus trichocarpa
POPTR_0017s02020
I
0.929
PRUPE_ppa002384mg
Prunus persica
PRUPE_ppa002384mg
I
0.933
Sb01g049240
Sorghum bicolor
Sb01g049240
I
0.943
Sb02g032220
Sorghum bicolor
Sb02g032220
I
0.921
Si033085m.g
Setaria italica
Si033085m.g
I
0.920
Si034541m.g
Setaria italica
Si034541m.g
I
0.943
Solyc02g036430.1
Solanum lycopersicum
Solyc02g036430.1
I
0.919
Solyc02g081270.2
Solanum lycopersicum
Solyc02g081270.2
I
0.929
Solyc03g098190.2
Solanum lycopersicum
Solyc03g098190.2
I
0.925
TCM_017681
Theobroma cacao
TCM_017681
I
0.936
TCM_033629
Theobroma cacao
TCM_033629
I
0.929
TCM_044911
Theobroma cacao
TCM_044911
I
0.940
Traes_4BL_D592DBAAF
Triticum aestivum
Traes_4BL_D592DBAAF
I
0.939
Traes_4DL_A13AE4BE6
Triticum aestivum
Traes_4DL_A13AE4BE6
I
0.939
Traes_5AL_59A8F0CBD
Triticum aestivum
Traes_5AL_59A8F0CBD
I
0.892
Traes_5BL_581C3F5DA
Triticum aestivum
Traes_5BL_581C3F5DA
I
0.892
Traes_5BL_8BE382FE3
Triticum aestivum
Traes_5BL_8BE382FE3
I
0.875
Traes_5DL_B69423A67
Triticum aestivum
Traes_5DL_B69423A67
I
0.875
TRIUR3_13805
Triticum urartu
TRIUR3_13805
I
0.875
TRIUR3_13806
Triticum urartu
TRIUR3_13806
I
0.892
VIT_04s0079g00280
Vitis vinifera
VIT_04s0079g00280
I
0.936
anac057
Vitis vinifera
VIT_17s0053g00740
I
0.939
ANAC020
Vitis vinifera
VIT_19s0085g00950
I
0.901
Ca_13258
Cicer arietinum
Ca_13258
I
0.935
Ca_14390
Cicer arietinum
Ca_14390
I
0.930
Ca_18034
Cicer arietinum
Ca_18034
I
0.924
Ca_23537
Cicer arietinum
Ca_23537
I
0.902
Cla009281
Citrullus lanatus
Cla009281
I
0.936
Cla013653
Citrullus lanatus
Cla013653
I
0.923
Cla018917
Citrullus lanatus
Cla018917
I
0.925
Pm010926
Prunus mume
Pm010926
I
0.913
Pm012993
Prunus mume
Pm012993
I
0.933
29770.m000336
Ricinus communis
29770.m000336
I
0.908
30171.m000407
Ricinus communis
30171.m000407
I
0.929
30172.m000206
Ricinus communis
30172.m000206
I
0.927
cassava20891.m1
Manihot esculenta
cassava20891.m1
I
0.908
cassava30278.valid.m1
Manihot esculenta
cassava30278.valid.m1
I
0.927
cassava38739.m1
Manihot esculenta
cassava38739.m1
I
0.929
cassava4611.m1
Manihot esculenta
cassava4611.m1
I
0.925
Cucsa.112500
Cucumis sativus
Cucsa.112500
I
0.925
Cucsa.118620
Cucumis sativus
Cucsa.118620
I
0.923
Cucsa.173670
Cucumis sativus
Cucsa.173670
I
0.936
mgf009479m
Mimulus guttatus
mgf009479m
I
0.925
mgf025206m
Mimulus guttatus
mgf025206m
I
0.935
Aquca_002_01357
Aquilegia coerulea
Aquca_002_01357
I
0.924
Aquca_002_01358
Aquilegia coerulea
Aquca_002_01358
I
0.922
Bostr.19046s0031
Boechera stricta
Bostr.19046s0031
I
0.948
Bostr.19424s0897
Boechera stricta
Bostr.19424s0897
I
0.928
Bostr.2618s0061
Boechera stricta
Bostr.2618s0061
I
0.957
Bostr.26959s0323
Boechera stricta
Bostr.26959s0323
I
0.916
Bostr.6758s0078
Boechera stricta
Bostr.6758s0078
I
0.902
Cagra.11446s0003
Capsella grandiflora
Cagra.11446s0003
I
0.916
Cagra.1310s0016
Capsella grandiflora
Cagra.1310s0016
I
0.899
Cagra.1378s0012
Capsella grandiflora
Cagra.1378s0012
I
0.897
Cagra.2098s0066
Capsella grandiflora
Cagra.2098s0066
I
0.948
Cagra.4849s0008
Capsella grandiflora
Cagra.4849s0008
I
0.956
Carubv10003869m.g
Capsella rubella
Carubv10003869m.g
I
0.956
Carubv10012163m.g
Capsella rubella
Carubv10012163m.g
I
0.899
Carubv10013584m.g
Capsella rubella
Carubv10013584m.g
I
0.948
Carubv10014426m.g
Capsella rubella
Carubv10014426m.g
I
0.928
Carubv10021788m.g
Capsella rubella
Carubv10021788m.g
I
0.916
Ciclev10005341m.g
Citrus clementina
Ciclev10005341m.g
I
0.902
Ciclev10011293m.g
Citrus clementina
Ciclev10011293m.g
I
0.934
Ciclev10024520m.g
Citrus clementina
Ciclev10024520m.g
I
0.939
Eucgr.F02910
Eucalyptus grandis
Eucgr.F02910
I
0.936
Eucgr.H00614
Eucalyptus grandis
Eucgr.H00614
I
0.910
Eucgr.K02303
Eucalyptus grandis
Eucgr.K02303
I
0.873
evm.TU.contig_29561
Carica papaya
evm.TU.contig_29561
I
0.873
evm.TU.supercontig_178.32
Carica papaya
evm.TU.supercontig_178.32
I
0.935
evm.TU.supercontig_38.43
Carica papaya
evm.TU.supercontig_38.43
I
0.873
gene09293-v1.0-hybrid
Fragaria vesca
gene09293-v1.0-hybrid
I
0.925
gene19716-v1.0-hybrid
Fragaria vesca
gene19716-v1.0-hybrid
I
0.929
gene31658-v1.0-hybrid
Fragaria vesca
gene31658-v1.0-hybrid
I
0.933
Gorai.001G070700
Gossypium raimondii
Gorai.001G070700
I
0.936
Gorai.004G048200
Gossypium raimondii
Gorai.004G048200
I
0.935
Gorai.004G268400
Gossypium raimondii
Gorai.004G268400
I
0.914
Gorai.006G189600
Gossypium raimondii
Gorai.006G189600
I
0.925
Gorai.007G188800
Gossypium raimondii
Gorai.007G188800
I
0.934
Gorai.013G146300
Gossypium raimondii
Gorai.013G146300
I
0.931
Lus10007377.g
Linum usitatissimum
Lus10007377.g
I
0.924
Lus10010959.g
Linum usitatissimum
Lus10010959.g
I
0.927
Lus10020794.g
Linum usitatissimum
Lus10020794.g
I
0.925
Lus10026373.g
Linum usitatissimum
Lus10026373.g
I
0.927
Lus10042284.g
Linum usitatissimum
Lus10042284.g
I
0.927
MDP0000199840
Malus domestica
MDP0000199840
I
0.915
MDP0000204582
Malus domestica
MDP0000204582
I
0.915
MDP0000276982
Malus domestica
MDP0000276982
I
0.933
MDP0000387787
Malus domestica
MDP0000387787
I
0.938
MDP0000520807
Malus domestica
MDP0000520807
I
0.933
MDP0000656113
Malus domestica
MDP0000656113
I
0.938
orange1.1g007938m.g
Citrus sinensis
orange1.1g007938m.g
I
0.934
orange1.1g036998m.g
Citrus sinensis
orange1.1g036998m.g
I
0.902
orange1.1g040617m.g
Citrus sinensis
orange1.1g040617m.g
I
0.939
Pavir.Ba01384
Panicum virgatum
Pavir.Ba01384
I
0.919
Pavir.Bb02627
Panicum virgatum
Pavir.Bb02627
I
0.920
Pavir.Ia04558
Panicum virgatum
Pavir.Ia04558
I
0.926
Pavir.Ib00051
Panicum virgatum
Pavir.Ib00051
I
0.926
SapurV1A.0074s0150
Salix purpurea
SapurV1A.0074s0150
I
0.928
SapurV1A.0147s0010
Salix purpurea
SapurV1A.0147s0010
I
0.927
SapurV1A.0149s0500
Salix purpurea
SapurV1A.0149s0500
I
0.922
SapurV1A.0202s0410
Salix purpurea
SapurV1A.0202s0410
I
0.937
SapurV1A.0549s0150
Salix purpurea
SapurV1A.0549s0150
I
0.929
SapurV1A.1584s0060
Salix purpurea
SapurV1A.1584s0060
I
0.927
SapurV1A.2754s0020
Salix purpurea
SapurV1A.2754s0020
I
0.928
Thhalv10013344m.g
Eutrema salsugineum
Thhalv10013344m.g
I
0.960
Thhalv10018275m.g
Eutrema salsugineum
Thhalv10018275m.g
I
0.916
Thhalv10021408m.g
Eutrema salsugineum
Thhalv10021408m.g
I
0.928
Thhalv10022055m.g
Eutrema salsugineum
Thhalv10022055m.g
I
0.948
Thhalv10023058m.g
Eutrema salsugineum
Thhalv10023058m.g
I
0.929
Thhalv10027064m.g
Eutrema salsugineum
Thhalv10027064m.g
I
0.901
PK03341.1
Cannabis sativa
PK03341.1
I
0.938
PDK_20s1433691g002
Phoenix dactylifera
PDK_20s1433691g002
I
0.918