CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA20G31210
(
Glycine max
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GLYMA20G31210
T293174_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA20G31210.1
NAC/NAM
20
146
MPGFRFHPTDEELVMYYLKRKICGKRLKLDVIHETDVYKWDPEDLPGQSILKTGDRQWFFFCHRDRKYPNGGRSNRATRRGYWKATGKDRNVICNSRSVGVKKTLVFYAGRAPSGERTDWVMHEYTL
GLYMA20G31210.2
NAC/NAM
20
146
MPGFRFHPTDEELVMYYLKRKICGKRLKLDVIHETDVYKWDPEDLPGQSILKTGDRQWFFFCHRDRKYPNGGRSNRATRRGYWKATGKDRNVICNSRSVGVKKTLVFYAGRAPSGERTDWVMHEYTL
GLYMA20G31210.4
NAC/NAM
20
146
MPGFRFHPTDEELVMYYLKRKICGKRLKLDVIHETDVYKWDPEDLPGQSILKTGDRQWFFFCHRDRKYPNGGRSNRATRRGYWKATGKDRNVICNSRSVGVKKTLVFYAGRAPSGERTDWVMHEYTL
Links
Other
NAC/NAM
family TFs
Other
Glycine max
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA10G36360
Glycine max
GLYMA10G36360
N
0.971
Ca_04337
Cicer arietinum
Ca_04337
N
0.961
MTR_1g097300
Medicago truncatula
MTR_1g097300
N
0.957
evm.TU.supercontig_26.135
Carica papaya
evm.TU.supercontig_26.135
I
0.954
Ciclev10000612m.g
Citrus clementina
Ciclev10000612m.g
I
0.951
LjSGA_007769.1
Lotus japonicus
LjSGA_007769.1
N
0.951
MDP0000852271
Malus domestica
MDP0000852271
I
0.949
PRUPE_ppa003410mg
Prunus persica
PRUPE_ppa003410mg
N
0.948
Pm022358
Prunus mume
Pm022358
N
0.948
gene27539-v1.0-hybrid
Fragaria vesca
gene27539-v1.0-hybrid
N
0.948
Lus10028713.g
Linum usitatissimum
Lus10028713.g
I
0.944
Eucgr.F02771
Eucalyptus grandis
Eucgr.F02771
N
0.938
TCM_036587
Theobroma cacao
TCM_036587
I
0.926
VIT_18s0001g01820
Vitis vinifera
VIT_18s0001g01820
I
0.924
Gorai.005G076200
Gossypium raimondii
Gorai.005G076200
I
0.923
Gorai.009G260000
Gossypium raimondii
Gorai.009G260000
I
0.923
MDP0000146969
Malus domestica
MDP0000146969
I
0.922
MDP0000169485
Malus domestica
MDP0000169485
I
0.922
POPTR_0002s06210
Populus trichocarpa
POPTR_0002s06210
I
0.921
POPTR_0005s22180
Populus trichocarpa
POPTR_0005s22180
I
0.919
cassava22173.valid.m1
Manihot esculenta
cassava22173.valid.m1
I
0.919
SapurV1A.0134s0420
Salix purpurea
SapurV1A.0134s0420
I
0.919
Cucsa.364130
Cucumis sativus
Cucsa.364130
N
0.913
Cla013854
Citrullus lanatus
Cla013854
I
0.912
SapurV1A.0348s0040
Salix purpurea
SapurV1A.0348s0040
I
0.912
Cla016588
Citrullus lanatus
Cla016588
N
0.898
cassava19069.valid.m1
Manihot esculenta
cassava19069.valid.m1
I
0.898
Aquca_017_00010
Aquilegia coerulea
Aquca_017_00010
N
0.880