CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G059428
(
Zea mays
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GRMZM2G059428
T293204_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G059428_P01
NAC/NAM
16
143
LPGFRFHPTEEELLGFYLSRVVHGKQLHFDIIGSLNIYRYDPWDLPAMAKIGEREWYFFVPRDRKAGSGGRPNRTTERGFWKATGSDRAIRSSADAKRVIGLKKTLVFYQGRAPRGTKTDWVMNEYRL
GRMZM2G059428_P02
NAC/NAM
2
81
AKIGEREWYFFVPRDRKAGSGGRPNRTTERGFWKATGSDRAIRSSADAKRVIGLKKTLVFYQGRAPRGTKTDWVMNEYRL
GRMZM2G059428_P03
NAC/NAM
16
143
LPGFRFHPTEEELLGFYLSRVVHGKQLHFDIIGSLNIYRYDPWDLPAMAKIGEREWYFFVPRDRKAGSGGRPNRTTERGFWKATGSDRAIRSSADAKRVIGLKKTLVFYQGRAPRGTKTDWVMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Zea mays
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G126817
Zea mays
GRMZM2G126817
N
0.946
LPERR03G02450
Leersia perrieri
LPERR03G02450
N
0.943
OMERI03G02480
Oryza meridionalis
OMERI03G02480
N
0.943
Pavir.Ia04458
Panicum virgatum
Pavir.Ia04458
N
0.942
Pavir.J24394
Panicum virgatum
Pavir.J24394
N
0.942
BGIOSGA011514
Oryza indica
BGIOSGA011514
N
0.941
OBART03G02620
Oryza barthii
OBART03G02620
N
0.941
OBART03G02630
Oryza barthii
OBART03G02630
N
0.941
OGLUM03G02560
Oryza glumaepatula
OGLUM03G02560
N
0.941
OLONG_016677
Oryza longistaminata
OLONG_016677
N
0.941
ONIVA03G02250
Oryza nivara
ONIVA03G02250
N
0.941
ORGLA03G0024300
Oryza glaberrima
ORGLA03G0024300
N
0.941
ORUFI03G02380
Oryza rufipogon
ORUFI03G02380
N
0.941
OS03G0133000
Oryza sativa
OS03G0133000
N
0.941
Sb01g048130
Sorghum bicolor
Sb01g048130
N
0.939
Si036757m.g
Setaria italica
Si036757m.g
N
0.938
TRIUR3_33949
Triticum urartu
TRIUR3_33949
N
0.935
OB03G12640
Oryza brachyantha
OB03G12640
N
0.931
TRIUR3_18560
Triticum urartu
TRIUR3_18560
N
0.929
OPUNC03G02420
Oryza punctata
OPUNC03G02420
N
0.920
Traes_4DL_7CB8EC5A8
Triticum aestivum
Traes_4DL_7CB8EC5A8
N
0.917
TRIUR3_32216
Triticum urartu
TRIUR3_32216
N
0.917
BRADI1G76207
Brachypodium distachyon
BRADI1G76207
N
0.914
F775_22671
Aegilops tauschii
F775_22671
N
0.914
Traes_4DL_B29067862
Triticum aestivum
Traes_4DL_B29067862
N
0.914
MLOC_65456
Hordeum vulgare
MLOC_65456
N
0.909
F775_22440
Aegilops tauschii
F775_22440
N
0.904
GSMUA_Achr11G01320_001
Musa acuminata
GSMUA_Achr11G01320_001
N
0.898
BGIOSGA020507
Oryza indica
BGIOSGA020507
N
0.890
OGLUM06G29360
Oryza glumaepatula
OGLUM06G29360
N
0.890
OMERI06G27920
Oryza meridionalis
OMERI06G27920
N
0.890
ONIVA06G30950
Oryza nivara
ONIVA06G30950
N
0.890
OPUNC06G25510
Oryza punctata
OPUNC06G25510
N
0.890
ORGLA06G0236900
Oryza glaberrima
ORGLA06G0236900
N
0.890
ORUFI06G29930
Oryza rufipogon
ORUFI06G29930
N
0.890
OS06G0726300
Oryza sativa
OS06G0726300
N
0.890
LPERR06G23420
Leersia perrieri
LPERR06G23420
N
0.889
GSMUA_Achr7G04030_001
Musa acuminata
GSMUA_Achr7G04030_001
N
0.881
GSMUA_AchrUn_randomG08220_001
Musa acuminata
GSMUA_AchrUn_randomG08220_001
N
0.876