CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

LPERR03G01990 *(Leersia perrieri)* NAC/NAM
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF02365 (NAM)	IPR003441	LPERR03G01990	T293522_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
NAC037 M07187_2.00	Arabidopsis thaliana	CKTVNDNHNYAMG	CKTRNDNHNBAMG	Dap-seq OMalley et al.(2016) VND1_col_a	0.965	0.912
ANAC076 M07224_2.00	Arabidopsis thaliana	TRCKTVHNNHNYAMG	CKTRNDNNDBAMGYA	Dap-seq OMalley et al.(2016) VND2_col_a	0.962	0.930
ANAC076 M07225_2.00	Arabidopsis thaliana	TTGCKTVHNNHNYAMGYHAHNNN	NNNDTDRCKTRNDNNDBAMGCAA	Dap-seq OMalley et al.(2016) VND2_colamp_a	0.962	0.930
NAC105 M00980_2.00	Arabidopsis thaliana	NYWHKNHWNN	NNWDNMDWRN	PBM Lindemose et al.(2014) VND3	0.929	0.833
NAC105 M07245_2.00	Arabidopsis thaliana	NTTGCTTVNNNHNYAMG	CKTRNDNNNBAAGCAAN	Dap-seq OMalley et al.(2016) VND3_colamp_a	0.929	0.833
NAC105 M07246_2.00	Arabidopsis thaliana	TTGCTTVHNNHNYAMG	CKTRNDNNDBAAGCAA	Dap-seq OMalley et al.(2016) VND3_col	0.929	0.833
NAC007 M07164_2.00	Arabidopsis thaliana	TTRCKTVHDNNNYAMG	CKTRNNNHDBAMGYAA	Dap-seq OMalley et al.(2016) VND4_colamp_a	0.929	0.842
NAC007 M07165_2.00	Arabidopsis thaliana	TGCKTVHDNHDYAMG	CKTRHDNHDBAMGCA	Dap-seq OMalley et al.(2016) VND4_col	0.929	0.842
NAC030 M00974_2.00	Arabidopsis thaliana	NYACGBMWNN	NNWKVCGTRN	PBM Lindemose et al.(2014) VND7	0.876	0.781
For this family, TFs with SR scores > 0.870* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
LPERR03G01990.1	NAC/NAM	16	143	PPGFRFHPTDEELVGYYLRKKVASQKIDLDVIRDIDLYRIEPWDLQEHCGIGYEEQSEWYFFSYKDRKYPTGTRTNRATMAGFWKATGRDKAVHERSRLIGMRKTLVFYKGRAPNGQKTDWIMHEYRL

Links
Other NAC/NAM family TFs
Other *Leersia perrieri* TFs

336 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
MTERF2	Ochotona princeps	ENSOPRG00000008669	N
Myotis_brandtii_Cry1_10020414	Myotis brandtii	Myotis_brandtii_Cry1_10020414	N
ENSP00000240050-D1	Bos grunniens	ENSP00000240050-D1	N
MTERF2	Vicugna pacos	ENSVPAG00000008539	N
MTERF2	Tursiops truncatus	ENSTTRG00000012809	N
ENSSTOG00000010181	Ictidomys tridecemlineatus	ENSSTOG00000010181	N
MTERF2	Pan troglodytes	ENSPTRG00000005395	N
ENSPPYG00000004910	Pongo abelii	ENSPPYG00000004910	N
MTERF2	Procavia capensis	ENSPCAG00000008234	N
MTERF2	Bos taurus	ENSBTAG00000010144	N
MTERF2	Ornithorhynchus anatinus	ENSOANG00000005531	N
ENSNLEG00000006719	Nomascus leucogenys	ENSNLEG00000006719	N
Mterf2	Mus musculus	ENSMUSG00000049038	N
MTERF2	Monodelphis domestica	ENSMODG00000001589	N
MTERF2	Gorilla gorilla	ENSGGOG00000025492	N
MTERF2	Homo sapiens	ENSG00000120832	N
MTERF2	Callithrix jacchus	ENSCJAG00000015094	N