CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MTR_4g075980
(
Medicago truncatula
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
MTR_4g075980
T293772_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES89484
NAC/NAM
16
143
LPGFRFHPTEEELLDFYLKNMVVGKKLRYDVIGFLNIYHHDPCDLPGLSKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYEGRAPRGTKTDWVMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Medicago truncatula
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA11G10230
Glycine max
GLYMA11G10230
N
0.963
GLYMA12G02540
Glycine max
GLYMA12G02540
N
0.963
chr3.CM0460.350.nd
Lotus japonicus
chr3.CM0460.350.nd
N
0.961
Ca_11128
Cicer arietinum
Ca_11128
N
0.957
TCM_006499
Theobroma cacao
TCM_006499
N
0.945
Gorai.008G038800
Gossypium raimondii
Gorai.008G038800
N
0.941
MDP0000480581
Malus domestica
MDP0000480581
N
0.941
MDP0000868556
Malus domestica
MDP0000868556
N
0.941
Eucgr.I01494
Eucalyptus grandis
Eucgr.I01494
N
0.936
evm.TU.supercontig_320.2
Carica papaya
evm.TU.supercontig_320.2
N
0.931
PRUPE_ppa009455mg
Prunus persica
PRUPE_ppa009455mg
N
0.929
Pm020961
Prunus mume
Pm020961
N
0.929
VIT_04s0008g00150
Vitis vinifera
VIT_04s0008g00150
N
0.928
Aquca_015_00469
Aquilegia coerulea
Aquca_015_00469
N
0.928
cassava23439.valid.m1
Manihot esculenta
cassava23439.valid.m1
I
0.925
29797.m000353
Ricinus communis
29797.m000353
N
0.924
gene17203-v1.0-hybrid
Fragaria vesca
gene17203-v1.0-hybrid
N
0.923
anac036
Arabidopsis thaliana
AT2G17040
N
0.921
anac036
Arabidopsis lyrata
fgenesh2_kg.3__3291__AT2G17040.1
N
0.921
Ciclev10029007m.g
Citrus clementina
Ciclev10029007m.g
N
0.921
orange1.1g023427m.g
Citrus sinensis
orange1.1g023427m.g
N
0.921
mgf013168m
Mimulus guttatus
mgf013168m
N
0.920
POPTR_0004s18860
Populus trichocarpa
POPTR_0004s18860
N
0.916
Gorai.005G257800
Gossypium raimondii
Gorai.005G257800
N
0.915
SapurV1A.0080s0480
Salix purpurea
SapurV1A.0080s0480
N
0.913
cassava13355.valid.m1
Manihot esculenta
cassava13355.valid.m1
N
0.912
Gorai.002G001900
Gossypium raimondii
Gorai.002G001900
N
0.898
Bo7g015050
Brassica oleracea
Bo7g015050
N
0.897
29830.m001415
Ricinus communis
29830.m001415
N
0.897
cassava30341.valid.m1
Manihot esculenta
cassava30341.valid.m1
N
0.894
Cla007018
Citrullus lanatus
Cla007018
N
0.891
Thhalv10022800m.g
Eutrema salsugineum
Thhalv10022800m.g
N
0.889
Bo3g092020
Brassica oleracea
Bo3g092020
N
0.888
Bra013034
Brassica rapa
Bra013034
N
0.888
Cagra.0805s0005
Capsella grandiflora
Cagra.0805s0005
N
0.888
Carubv10014350m.g
Capsella rubella
Carubv10014350m.g
N
0.888
POPTR_0009s14370
Populus trichocarpa
POPTR_0009s14370
N
0.885
SapurV1A.0218s0020
Salix purpurea
SapurV1A.0218s0020
N
0.884
Bostr.18351s0165
Boechera stricta
Bostr.18351s0165
N
0.878
Gorai.003G003900
Gossypium raimondii
Gorai.003G003900
N
0.878
Cucsa.119310
Cucumis sativus
Cucsa.119310
N
0.877
Bra002018
Brassica rapa
Bra002018
N
0.872