CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_7g005280
(
Medicago truncatula
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
MTR_7g005280
T293796_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC083
M02374_2.00
Arabidopsis thaliana
WYACGYAANN
NNTTRCGTRW
PBM
Weirauch et al.(2014)
pTH7308
0.896
0.821
NAC083
M07230_2.00
Arabidopsis thaliana
TRCKTRWNNNDYAMG
CKTRHNNNWYAMGYA
Dap-seq
OMalley et al.(2016)
ANAC083_colamp_a
0.896
0.821
NAC083
M07231_2.00
Arabidopsis thaliana
TTNCKTRWNNHDYACGYWA
TWRCGTRHDNNWYAMGNAA
Dap-seq
OMalley et al.(2016)
ANAC083_col_v3a
0.896
0.821
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES77175
NAC/NAM
16
139
PPGFRFHPTDEELVVQYLKRKVFSFPLPASIIPEVDLCKSDPWDLPGDMEQERYFFSTKEAKYPNGNRSNRATNSGYWKATGLDKQIMNSKTHEVAGMKKTLVFYRGKPPHGSRTDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Medicago truncatula
TFs
57 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK12461.1
Cannabis sativa
PK12461.1
I
0.944
Lus10001809.g
Linum usitatissimum
Lus10001809.g
I
0.942
GLYMA08G47520
Glycine max
GLYMA08G47520
I
0.940
GLYMA18G53954
Glycine max
GLYMA18G53954
I
0.940
Lus10002581.g
Linum usitatissimum
Lus10002581.g
I
0.940
Eucgr.B03537
Eucalyptus grandis
Eucgr.B03537
I
0.929
SapurV1A.0173s0020
Salix purpurea
SapurV1A.0173s0020
I
0.925
SapurV1A.0453s0210
Salix purpurea
SapurV1A.0453s0210
I
0.925
POPTR_0003s16490
Populus trichocarpa
POPTR_0003s16490
I
0.924
chr1.CM0017.80.nc
Lotus japonicus
chr1.CM0017.80.nc
I
0.924
POPTR_0001s13380
Populus trichocarpa
POPTR_0001s13380
I
0.923
PRUPE_ppa010222mg
Prunus persica
PRUPE_ppa010222mg
I
0.922
TCM_008477
Theobroma cacao
TCM_008477
I
0.922
Cla001517
Citrullus lanatus
Cla001517
I
0.922
Pm007070
Prunus mume
Pm007070
I
0.922
Cucsa.349370
Cucumis sativus
Cucsa.349370
I
0.922
Gorai.005G195300
Gossypium raimondii
Gorai.005G195300
I
0.921
POPTR_0012s10530
Populus trichocarpa
POPTR_0012s10530
N
0.919
POPTR_0015s11420
Populus trichocarpa
POPTR_0015s11420
N
0.919
SapurV1A.1562s0030
Salix purpurea
SapurV1A.1562s0030
N
0.919
SapurV1A.1562s0040
Salix purpurea
SapurV1A.1562s0040
N
0.919
30147.m014441
Ricinus communis
30147.m014441
N
0.914
PGSC0003DMG400011891
Solanum tuberosum
PGSC0003DMG400011891
N
0.913
Solyc01g009860.2
Solanum lycopersicum
Solyc01g009860.2
N
0.913
TCM_014713
Theobroma cacao
TCM_014713
I
0.911
30128.m009035
Ricinus communis
30128.m009035
I
0.911
cassava1138.valid.m1
Manihot esculenta
cassava1138.valid.m1
I
0.909
Gorai.012G125500
Gossypium raimondii
Gorai.012G125500
I
0.909
evm.TU.supercontig_99.63
Carica papaya
evm.TU.supercontig_99.63
I
0.908
cassava12891.valid.m1
Manihot esculenta
cassava12891.valid.m1
I
0.907
Cagra.0301s0034
Capsella grandiflora
Cagra.0301s0034
N
0.907
Carubv10023833m.g
Capsella rubella
Carubv10023833m.g
N
0.907
MDP0000130123
Malus domestica
MDP0000130123
I
0.907
ANAC083
Vitis vinifera
VIT_01s0146g00280
I
0.906
Ciclev10032547m.g
Citrus clementina
Ciclev10032547m.g
I
0.906
MDP0000126517
Malus domestica
MDP0000126517
I
0.906
orange1.1g030727m.g
Citrus sinensis
orange1.1g030727m.g
I
0.906
Aquca_021_00051
Aquilegia coerulea
Aquca_021_00051
I
0.898
NAC041
Arabidopsis thaliana
AT2G33480
I
0.896
NAC083
Arabidopsis thaliana
AT5G13180
D
0.896
ANAC041
Arabidopsis lyrata
fgenesh2_kg.4__1354__AT2G33480.1
I
0.896
ANAC083
Arabidopsis lyrata
scaffold_601328.1
I
0.896
MDP0000130686
Malus domestica
MDP0000130686
N
0.896
cassava37235.valid.m1
Manihot esculenta
cassava37235.valid.m1
N
0.892
Thhalv10017152m.g
Eutrema salsugineum
Thhalv10017152m.g
I
0.890
Aquca_011_00050
Aquilegia coerulea
Aquca_011_00050
I
0.889
Bostr.2902s0053
Boechera stricta
Bostr.2902s0053
I
0.889
Cagra.0596s0010
Capsella grandiflora
Cagra.0596s0010
I
0.889
PRUPE_ppa027024mg
Prunus persica
PRUPE_ppa027024mg
N
0.888
Pm024558
Prunus mume
Pm024558
N
0.888
Bostr.23794s0753
Boechera stricta
Bostr.23794s0753
I
0.888
Carubv10002548m.g
Capsella rubella
Carubv10002548m.g
I
0.887
SapurV1A.0614s0190
Salix purpurea
SapurV1A.0614s0190
N
0.885
SapurV1A.1580s0010
Salix purpurea
SapurV1A.1580s0010
N
0.885
gene06460-v1.0-hybrid
Fragaria vesca
gene06460-v1.0-hybrid
N
0.882
evm.TU.supercontig_4.138
Carica papaya
evm.TU.supercontig_4.138
N
0.881
Eucgr.H03387
Eucalyptus grandis
Eucgr.H03387
I
0.879