CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM02G38020
(
Oryza glumaepatula
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
OGLUM02G38020
T294111_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC001
M00969_2.00
Arabidopsis thaliana
NYACGBHANN
NNTDVCGTRN
PBM
Lindemose et al.(2014)
FL092
0.879
0.383
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM02G38020.1
NAC/NAM
11
153
PPGFRFYPSDEELVCHYLHNKVLNQHRFAGVGAAAGGTMVEVDLHTHEPWELPDVAKLSTNEWYFFSFRDRKYATGLRTNRATKSGYWKATGKDRVIHNPKLHAAAAAHRRASIVGMRKTLVFYRGRAPNGVKTNWVMHEFRM
OGLUM02G38020.2
NAC/NAM
11
153
PPGFRFYPSDEELVCHYLHNKVLNQHRFAGVGAAAGGTMVEVDLHTHEPWELPDVAKLSTNEWYFFSFRDRKYATGLRTNRATKSGYWKATGKDRVIHNPKLHAAAAAHRRASIVGMRKTLVFYRGRAPNGVKTNWVMHEFRM
Links
Other
NAC/NAM
family TFs
Other
Oryza glumaepatula
TFs
89 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR02G30240
Leersia perrieri
LPERR02G30240
I
0.993
Sb04g036640
Sorghum bicolor
Sb04g036640
I
0.987
Si017967m.g
Setaria italica
Si017967m.g
I
0.987
Pavir.Aa00144
Panicum virgatum
Pavir.Aa00144
I
0.987
Pavir.J34679
Panicum virgatum
Pavir.J34679
I
0.987
BRADI3G54817
Brachypodium distachyon
BRADI3G54817
N
0.985
Traes_6BL_D00F04562
Triticum aestivum
Traes_6BL_D00F04562
I
0.985
GRMZM5G857701
Zea mays
GRMZM5G857701
I
0.984
GRMZM2G140901
Zea mays
GRMZM2G140901
I
0.982
BGIOSGA009257
Oryza indica
BGIOSGA009257
N
0.971
OB02G43380
Oryza brachyantha
OB02G43380
N
0.971
OBART02G36830
Oryza barthii
OBART02G36830
N
0.971
OMERI02G34720
Oryza meridionalis
OMERI02G34720
N
0.971
ONIVA02G39640
Oryza nivara
ONIVA02G39640
N
0.971
OPUNC02G33860
Oryza punctata
OPUNC02G33860
N
0.971
ORGLA02G0320500
Oryza glaberrima
ORGLA02G0320500
N
0.971
ORUFI02G38340
Oryza rufipogon
ORUFI02G38340
N
0.971
OS02G0810900
Oryza sativa
OS02G0810900
N
0.971
Traes_6AL_B92597EA9
Triticum aestivum
Traes_6AL_B92597EA9
N
0.945
TRIUR3_32754
Triticum urartu
TRIUR3_32754
N
0.945
MLOC_5165
Hordeum vulgare
MLOC_5165
N
0.944
Traes_6BL_99F790D57
Triticum aestivum
Traes_6BL_99F790D57
N
0.944
F775_08585
Aegilops tauschii
F775_08585
N
0.942
Traes_6AL_B272C86BE
Triticum aestivum
Traes_6AL_B272C86BE
N
0.942
Traes_6DL_8A1342D56
Triticum aestivum
Traes_6DL_8A1342D56
N
0.942
TRIUR3_23299
Triticum urartu
TRIUR3_23299
N
0.942
F775_17109
Aegilops tauschii
F775_17109
N
0.941
Traes_6DL_1ABE78799
Triticum aestivum
Traes_6DL_1ABE78799
N
0.941
Pavir.Ib03261
Panicum virgatum
Pavir.Ib03261
N
0.937
Si036835m.g
Setaria italica
Si036835m.g
N
0.934
Pavir.J11268
Panicum virgatum
Pavir.J11268
N
0.914
GSMUA_Achr5G18670_001
Musa acuminata
GSMUA_Achr5G18670_001
N
0.909
GSMUA_AchrUn_randomG02760_001
Musa acuminata
GSMUA_AchrUn_randomG02760_001
N
0.899
PDK_20s1301681g003
Phoenix dactylifera
PDK_20s1301681g003
N
0.898
gene08112-v1.0-hybrid
Fragaria vesca
gene08112-v1.0-hybrid
N
0.897
ORUFI04G27160
Oryza rufipogon
ORUFI04G27160
N
0.896
Gorai.007G147300
Gossypium raimondii
Gorai.007G147300
N
0.896
GSMUA_Achr1G20530_001
Musa acuminata
GSMUA_Achr1G20530_001
N
0.894
PRUPE_ppa009628mg
Prunus persica
PRUPE_ppa009628mg
N
0.894
Pm020580
Prunus mume
Pm020580
N
0.894
MDP0000697030
Malus domestica
MDP0000697030
N
0.894
PK19051.1
Cannabis sativa
PK19051.1
N
0.893
Eucgr.K03256
Eucalyptus grandis
Eucgr.K03256
N
0.892
Sb04g026440
Sorghum bicolor
Sb04g026440
N
0.890
Pavir.Aa01668
Panicum virgatum
Pavir.Aa01668
N
0.890
BGIOSGA016756
Oryza indica
BGIOSGA016756
N
0.889
MTR_7g097090
Medicago truncatula
MTR_7g097090
N
0.889
OB04G25790
Oryza brachyantha
OB04G25790
N
0.889
OBART04G18700
Oryza barthii
OBART04G18700
N
0.889
OGLUM04G18750
Oryza glumaepatula
OGLUM04G18750
N
0.889
ONIVA04G01950
Oryza nivara
ONIVA04G01950
N
0.889
OPUNC04G16450
Oryza punctata
OPUNC04G16450
N
0.889
ORGLA04G0158100
Oryza glaberrima
ORGLA04G0158100
N
0.889
ORUFI04G20200
Oryza rufipogon
ORUFI04G20200
N
0.889
OS04G0515900
Oryza sativa
OS04G0515900
N
0.889
Si018001m.g
Setaria italica
Si018001m.g
N
0.889
mgf018312m
Mimulus guttatus
mgf018312m
N
0.889
Gorai.001G178800
Gossypium raimondii
Gorai.001G178800
N
0.889
Pavir.Gb00655
Panicum virgatum
Pavir.Gb00655
N
0.888
GSMUA_Achr8G18980_001
Musa acuminata
GSMUA_Achr8G18980_001
N
0.887
cassava41082.m1
Manihot esculenta
cassava41082.m1
N
0.887
Ciclev10021312m.g
Citrus clementina
Ciclev10021312m.g
N
0.887
TCM_003998
Theobroma cacao
TCM_003998
N
0.886
Gorai.001G254300
Gossypium raimondii
Gorai.001G254300
N
0.886
GRMZM2G062009
Zea mays
GRMZM2G062009
N
0.885
OLONG_011232
Oryza longistaminata
OLONG_011232
N
0.885
Pavir.Ab02337
Panicum virgatum
Pavir.Ab02337
N
0.885
Pavir.Ga01251
Panicum virgatum
Pavir.Ga01251
N
0.885
GSMUA_Achr11G00880_001
Musa acuminata
GSMUA_Achr11G00880_001
N
0.884
Solyc06g008360.2
Solanum lycopersicum
Solyc06g008360.2
N
0.884
GRMZM2G081930
Zea mays
GRMZM2G081930
N
0.883
PGSC0003DMG400020147
Solanum tuberosum
PGSC0003DMG400020147
N
0.883
BGIOSGA014342
Oryza indica
BGIOSGA014342
N
0.882
Si010799m.g
Setaria italica
Si010799m.g
N
0.880
Aquca_017_00744
Aquilegia coerulea
Aquca_017_00744
N
0.880
NAC001
Arabidopsis thaliana
AT1G01010
D
0.879
PGSC0003DMG400025505
Solanum tuberosum
PGSC0003DMG400025505
N
0.879
GRMZM2G043813
Zea mays
GRMZM2G043813
N
0.878
Solyc09g025310.2
Solanum lycopersicum
Solyc09g025310.2
N
0.878
GLYMA19G34881
Glycine max
GLYMA19G34881
N
0.877
Lus10033905.g
Linum usitatissimum
Lus10033905.g
N
0.875
MTR_1g069805
Medicago truncatula
MTR_1g069805
N
0.874
Ca_07743
Cicer arietinum
Ca_07743
N
0.874
BRADI5G15587
Brachypodium distachyon
BRADI5G15587
N
0.872
GLYMA10G04350
Glycine max
GLYMA10G04350
N
0.872
GLYMA13G18620
Glycine max
GLYMA13G18620
N
0.872
MLOC_12466
Hordeum vulgare
MLOC_12466
N
0.872
SapurV1A.0006s0680
Salix purpurea
SapurV1A.0006s0680
N
0.870