CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS02G0822400
(
Oryza sativa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
OS02G0822400
T295012_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC050
M07200_2.00
Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG
Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a
0.876
0.711
ANAC050
M07201_2.00
Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG
Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a
0.876
0.711
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS02T0822400-01
NAC/NAM
17
152
APGFRFHPTDEELVSYYLRRRILGRRLRIDAIAEVDLYRLEPWDLPSLSRIRSRDAQWYFFARLDRKVTGAGAGGRGGPGNRTNRATPRGYWKTTGKDRDVHHRGKLVGMKKTLVFHSGRAPKGQRTNWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Oryza sativa
TFs
57 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy