PGSC0003DMG400005807 (Solanum tuberosum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 PGSC0003DMG400005807 T295105_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MDP0000762302
M02383_2.00
Malus domestica
NNNAMKHNWN

NWNDMKTNNN
PBM
Weirauch et al.(2014)
pTH9205
0.903 0.848
NAC012
M00971_2.00
Arabidopsis thaliana
NYAMGYHANN

NNTDRCKTRN
PBM
Lindemose et al.(2014)
SND1
0.883 0.821
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400014871 NAC/NAM 12 134
PGSC0003DMT400014872 NAC/NAM 12 139

Links

Other NAC/NAM family TFs
Other Solanum tuberosum TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Solyc08g008660.2 Solanum lycopersicum Solyc08g008660.2 I 0.955
GLYMA19G44890 Glycine max GLYMA19G44890 I 0.917
SapurV1A.0941s0070 Salix purpurea SapurV1A.0941s0070 I 0.911
SapurV1A.2717s0010 Salix purpurea SapurV1A.2717s0010 I 0.911
GLYMA19G44910 Glycine max GLYMA19G44910 N 0.911
POPTR_0001s45250 Populus trichocarpa POPTR_0001s45250 I 0.911
PGSC0003DMG400012113 Solanum tuberosum PGSC0003DMG400012113 I 0.909
POPTR_0011s15640 Populus trichocarpa POPTR_0011s15640 I 0.906
Eucgr.E01053 Eucalyptus grandis Eucgr.E01053 I 0.906
SapurV1A.0131s0060 Salix purpurea SapurV1A.0131s0060 I 0.906
PK22182.1 Cannabis sativa PK22182.1 I 0.905
MDP0000762302 Malus domestica MDP0000762302 D 0.903
MDP0000140229 Malus domestica MDP0000140229 I 0.903
cassava45846.m1 Manihot esculenta cassava45846.m1 I 0.900
evm.TU.supercontig_37.89 Carica papaya evm.TU.supercontig_37.89 I 0.899
Gorai.008G259700 Gossypium raimondii Gorai.008G259700 I 0.898
Ciclev10021141m.g Citrus clementina Ciclev10021141m.g I 0.897
gene01881-v1.0-hybrid Fragaria vesca gene01881-v1.0-hybrid I 0.897
PGSC0003DMG400011268 Solanum tuberosum PGSC0003DMG400011268 I 0.897
Gorai.004G129200 Gossypium raimondii Gorai.004G129200 I 0.897
cassava42638.valid.m1 Manihot esculenta cassava42638.valid.m1 I 0.897
TCM_015621 Theobroma cacao TCM_015621 I 0.897
orange1.1g014260m.g Citrus sinensis orange1.1g014260m.g I 0.897
Solyc10g005010.2 Solanum lycopersicum Solyc10g005010.2 I 0.897
30068.m002591 Ricinus communis 30068.m002591 I 0.897
Pm024260 Prunus mume Pm024260 I 0.896
PRUPE_ppa006801mg Prunus persica PRUPE_ppa006801mg I 0.896
Gorai.003G077700 Gossypium raimondii Gorai.003G077700 I 0.891
Lus10017340.g Linum usitatissimum Lus10017340.g I 0.888
Lus10001664.g Linum usitatissimum Lus10001664.g I 0.888
cassava32649.m1 Manihot esculenta cassava32649.m1 I 0.887
SapurV1A.0907s0070 Salix purpurea SapurV1A.0907s0070 I 0.886
Lus10008271.g Linum usitatissimum Lus10008271.g I 0.885
Lus10033239.g Linum usitatissimum Lus10033239.g I 0.885
GSMUA_Achr3G12230_001 Musa acuminata GSMUA_Achr3G12230_001 I 0.884
Thhalv10009336m.g Eutrema salsugineum Thhalv10009336m.g I 0.883
Cagra.14513s0001 Capsella grandiflora Cagra.14513s0001 I 0.883
Carubv10011900m.g Capsella rubella Carubv10011900m.g I 0.883
ANAC012 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002619 I 0.883
Gorai.008G130300 Gossypium raimondii Gorai.008G130300 I 0.883
NAC012 Arabidopsis thaliana AT1G32770 D 0.883
VIT_15s0048g02660 Vitis vinifera VIT_15s0048g02660 I 0.882
Bo5g049360 Brassica oleracea Bo5g049360 I 0.882
Bostr.3359s0081 Boechera stricta Bostr.3359s0081 I 0.882
POPTR_0019s09400 Populus trichocarpa POPTR_0019s09400 I 0.881
PDK_20s1408241g001 Phoenix dactylifera PDK_20s1408241g001 I 0.881
GSMUA_Achr9G24450_001 Musa acuminata GSMUA_Achr9G24450_001 I 0.879
Bra023288 Brassica rapa Bra023288 I 0.878
PDK_20s1484021g001 Phoenix dactylifera PDK_20s1484021g001 N 0.877
Aquca_037_00272 Aquilegia coerulea Aquca_037_00272 I 0.876
Gorai.006G205300 Gossypium raimondii Gorai.006G205300 I 0.876
orange1.1g015853m.g Citrus sinensis orange1.1g015853m.g I 0.871
Ciclev10024035m.g Citrus clementina Ciclev10024035m.g I 0.871
ANAC012 Vitis vinifera VIT_02s0025g02710 I 0.870