POPTR_0001s13380 (Populus trichocarpa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 POPTR_0001s13380 T295204_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC083
M02374_2.00 		Arabidopsis thaliana
WYACGYAANN
NNTTRCGTRW		 PBM
Weirauch et al.(2014)
pTH7308 		0.934 0.868
NAC083
M07230_2.00 		Arabidopsis thaliana
TRCKTRWNNNDYAMG
CKTRHNNNWYAMGYA		 Dap-seq
OMalley et al.(2016)
ANAC083_colamp_a 		0.934 0.868
NAC083
M07231_2.00 		Arabidopsis thaliana
TTNCKTRWNNHDYACGYWA
TWRCGTRHDNNWYAMGNAA		 Dap-seq
OMalley et al.(2016)
ANAC083_col_v3a 		0.934 0.868
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s13380.1 NAC/NAM 15 138

Links

Other NAC/NAM family TFs
Other Populus trichocarpa TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CFIO01_03452 Colletotrichum fioriniae CFIO01_03452 N
CGGC5_2716 Colletotrichum gloeosporioides CGGC5_2716 N
GLRG_06241 Colletotrichum graminicola GLRG_06241 N
CH063_09269 Colletotrichum higginsianum CH063_09269 N
Cob_07244 Colletotrichum orbiculare Cob_07244 N
CSUB01_09713 Colletotrichum sublineola CSUB01_09713 N
gw1.2.242.1 Cryphonectria parasitica gw1.2.242.1 N
VDBG_05705 Verticillium alfalfae VDBG_05705 N