CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0007s08340
(
Populus trichocarpa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
POPTR_0007s08340
T295274_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
JUB1
M07191_2.00
Arabidopsis thaliana
YKCCGTNNNNNHNMCGBHRY
RYDVCGKNDNNNNNACGGMR
Dap-seq
OMalley et al.(2016)
ANAC042_col_a
0.946
0.816
ANAC094
M07236_2.00
Arabidopsis thaliana
YDCCGTNNNNNHNACGBH
DVCGTNDNNNNNACGGHR
Dap-seq
OMalley et al.(2016)
ANAC094_col_a
0.893
0.719
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0007s08340.1
NAC/NAM
23
151
LPGFRFHPTDEELVGFYLRRKVDKKPLNIELIKQVDIYKYDPWDLPKPSSVGDNEGYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSLGGEGRDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Populus trichocarpa
TFs
256 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30169.m006343
Ricinus communis
30169.m006343
I
0.973
cassava34069.m1
Manihot esculenta
cassava34069.m1
I
0.972
cassava20477.m1
Manihot esculenta
cassava20477.m1
I
0.969
Ciclev10005465m.g
Citrus clementina
Ciclev10005465m.g
I
0.969
Ciclev10006695m.g
Citrus clementina
Ciclev10006695m.g
I
0.969
orange1.1g046948m.g
Citrus sinensis
orange1.1g046948m.g
I
0.969
GLYMA15G40950
Glycine max
GLYMA15G40950
I
0.955
chr3.CM0176.150.nc
Lotus japonicus
chr3.CM0176.150.nc
I
0.952
SapurV1A.0354s0230
Salix purpurea
SapurV1A.0354s0230
I
0.951
VIT_19s0027g00870
Vitis vinifera
VIT_19s0027g00870
I
0.950
TCM_032393
Theobroma cacao
TCM_032393
I
0.949
GLYMA14G03441
Glycine max
GLYMA14G03441
I
0.948
PRUPE_ppa022043mg
Prunus persica
PRUPE_ppa022043mg
I
0.948
POPTR_0005s10080
Populus trichocarpa
POPTR_0005s10080
I
0.947
Cla005599
Citrullus lanatus
Cla005599
I
0.947
SapurV1A.0085s0430
Salix purpurea
SapurV1A.0085s0430
I
0.947
JUB1
Arabidopsis thaliana
AT2G43000
D
0.946
Bo4g192870
Brassica oleracea
Bo4g192870
I
0.946
Bra037743
Brassica rapa
Bra037743
I
0.946
anac042
Arabidopsis lyrata
fgenesh2_kg.4__2460__AT2G43000.1
I
0.946
Gorai.001G091900
Gossypium raimondii
Gorai.001G091900
I
0.946
chr2.LjT04L10.100.nc
Lotus japonicus
chr2.LjT04L10.100.nc
I
0.945
Bra004736
Brassica rapa
Bra004736
I
0.944
GLYMA02G45371
Glycine max
GLYMA02G45371
I
0.944
MTR_5g040420
Medicago truncatula
MTR_5g040420
I
0.944
mgf023960m
Mimulus guttatus
mgf023960m
I
0.944
Cagra.0202s0012
Capsella grandiflora
Cagra.0202s0012
I
0.944
Carubv10023730m.g
Capsella rubella
Carubv10023730m.g
I
0.944
gene03833-v1.0-hybrid
Fragaria vesca
gene03833-v1.0-hybrid
I
0.944
BGIOSGA009044
Oryza indica
BGIOSGA009044
I
0.943
BRADI4G30177
Brachypodium distachyon
BRADI4G30177
I
0.943
GRMZM2G100593
Zea mays
GRMZM2G100593
I
0.943
LPERR02G26510
Leersia perrieri
LPERR02G26510
I
0.943
OB02G39340
Oryza brachyantha
OB02G39340
I
0.943
OBART02G32360
Oryza barthii
OBART02G32360
I
0.943
OGLUM02G33000
Oryza glumaepatula
OGLUM02G33000
I
0.943
OLONG_016322
Oryza longistaminata
OLONG_016322
I
0.943
OMERI02G31030
Oryza meridionalis
OMERI02G31030
I
0.943
ONIVA06G04660
Oryza nivara
ONIVA06G04660
I
0.943
OPUNC02G29910
Oryza punctata
OPUNC02G29910
I
0.943
ORGLA02G0278900
Oryza glaberrima
ORGLA02G0278900
I
0.943
ORUFI02G34050
Oryza rufipogon
ORUFI02G34050
I
0.943
OS02G0745250
Oryza sativa
OS02G0745250
I
0.943
POPTR_0004s12850
Populus trichocarpa
POPTR_0004s12850
I
0.943
POPTR_0005s22710
Populus trichocarpa
POPTR_0005s22710
I
0.943
Sb04g028015
Sorghum bicolor
Sb04g028015
I
0.943
Si019308m.g
Setaria italica
Si019308m.g
I
0.943
Traes_5AL_F35B9FF8E
Triticum aestivum
Traes_5AL_F35B9FF8E
I
0.943
Traes_5BL_38DFDFE41
Triticum aestivum
Traes_5BL_38DFDFE41
I
0.943
Traes_5DL_0713E8429
Triticum aestivum
Traes_5DL_0713E8429
I
0.943
TRIUR3_01901
Triticum urartu
TRIUR3_01901
I
0.943
VIT_19s0027g00860
Vitis vinifera
VIT_19s0027g00860
I
0.943
Aquca_026_00367
Aquilegia coerulea
Aquca_026_00367
I
0.943
Pavir.Aa00706
Panicum virgatum
Pavir.Aa00706
I
0.943
Pavir.Ab02998
Panicum virgatum
Pavir.Ab02998
I
0.943
Pavir.Bb02181
Panicum virgatum
Pavir.Bb02181
I
0.943
PGSC0003DMG400001323
Solanum tuberosum
PGSC0003DMG400001323
I
0.942
Solyc02g087920.2
Solanum lycopersicum
Solyc02g087920.2
I
0.942
Traes_5AL_F2A49EB8E
Triticum aestivum
Traes_5AL_F2A49EB8E
I
0.942
TRIUR3_04784
Triticum urartu
TRIUR3_04784
I
0.942
Pm014764
Prunus mume
Pm014764
I
0.942
Eucgr.F01463
Eucalyptus grandis
Eucgr.F01463
I
0.942
Lus10031189.g
Linum usitatissimum
Lus10031189.g
I
0.942
Lus10031767.g
Linum usitatissimum
Lus10031767.g
I
0.942
CM1835.10.nc
Lotus japonicus
CM1835.10.nc
I
0.942
LjT46I09.50.nd
Lotus japonicus
LjT46I09.50.nd
I
0.942
AC198937.4_FG005
Zea mays
AC198937.4_FG005
I
0.941
GRMZM2G152543
Zea mays
GRMZM2G152543
I
0.941
Pm015876
Prunus mume
Pm015876
I
0.941
BRADI3G59380
Brachypodium distachyon
BRADI3G59380
I
0.940
POPTR_0002s05820
Populus trichocarpa
POPTR_0002s05820
I
0.940
PRUPE_ppa016710mg
Prunus persica
PRUPE_ppa016710mg
I
0.940
Traes_6AL_0D7866801
Triticum aestivum
Traes_6AL_0D7866801
I
0.940
Traes_6BL_A169A3ECB
Triticum aestivum
Traes_6BL_A169A3ECB
I
0.940
Traes_6DL_DA233B945
Triticum aestivum
Traes_6DL_DA233B945
I
0.940
Cla013684
Citrullus lanatus
Cla013684
I
0.940
PGSC0003DMG400031266
Solanum tuberosum
PGSC0003DMG400031266
I
0.939
Si015514m.g
Setaria italica
Si015514m.g
I
0.939
Si032144m.g
Setaria italica
Si032144m.g
I
0.939
mgf026196m
Mimulus guttatus
mgf026196m
I
0.939
Ciclev10032203m.g
Citrus clementina
Ciclev10032203m.g
I
0.939
orange1.1g021785m.g
Citrus sinensis
orange1.1g021785m.g
I
0.939
Pavir.Fa00893
Panicum virgatum
Pavir.Fa00893
I
0.939
Pavir.J08304
Panicum virgatum
Pavir.J08304
I
0.939
F775_04018
Aegilops tauschii
F775_04018
I
0.938
Sb02g024593
Sorghum bicolor
Sb02g024593
I
0.938
TCM_001955
Theobroma cacao
TCM_001955
I
0.938
anac042
Vitis vinifera
VIT_12s0028g00860
I
0.938
Aquca_006_00295
Aquilegia coerulea
Aquca_006_00295
I
0.938
BGIOSGA028728
Oryza indica
BGIOSGA028728
I
0.937
GRMZM2G159094
Zea mays
GRMZM2G159094
I
0.937
LPERR08G13170
Leersia perrieri
LPERR08G13170
I
0.937
MTR_6g011860
Medicago truncatula
MTR_6g011860
I
0.937
OB08G23420
Oryza brachyantha
OB08G23420
I
0.937
OBART08G15880
Oryza barthii
OBART08G15880
I
0.937
OGLUM08G16650
Oryza glumaepatula
OGLUM08G16650
I
0.937
OMERI08G13180
Oryza meridionalis
OMERI08G13180
I
0.937
ONIVA08G17120
Oryza nivara
ONIVA08G17120
I
0.937
OPUNC08G13940
Oryza punctata
OPUNC08G13940
I
0.937
ORUFI08G17800
Oryza rufipogon
ORUFI08G17800
I
0.937
VIT_01s0026g02360
Vitis vinifera
VIT_01s0026g02360
I
0.937
Ciclev10011891m.g
Citrus clementina
Ciclev10011891m.g
I
0.937
Gorai.002G036700
Gossypium raimondii
Gorai.002G036700
I
0.937
OS08G0436700
Oryza sativa
OS08G0436700
I
0.936
Sb07g021400
Sorghum bicolor
Sb07g021400
I
0.936
Solyc05g007550.1
Solanum lycopersicum
Solyc05g007550.1
I
0.936
Gorai.009G357700
Gossypium raimondii
Gorai.009G357700
I
0.936
orange1.1g015827m.g
Citrus sinensis
orange1.1g015827m.g
I
0.936
POPTR_0017s11830
Populus trichocarpa
POPTR_0017s11830
I
0.935
VIT_19s0027g00840
Vitis vinifera
VIT_19s0027g00840
I
0.935
Ca_26322
Cicer arietinum
Ca_26322
I
0.935
29032.m000021
Ricinus communis
29032.m000021
I
0.935
mgf025649m
Mimulus guttatus
mgf025649m
I
0.935
Bostr.25993s0479
Boechera stricta
Bostr.25993s0479
I
0.935
Eucgr.I01940
Eucalyptus grandis
Eucgr.I01940
I
0.935
Lus10015367.g
Linum usitatissimum
Lus10015367.g
I
0.935
Bo3g036290
Brassica oleracea
Bo3g036290
I
0.934
Bra000282
Brassica rapa
Bra000282
I
0.934
GLYMA08G41260
Glycine max
GLYMA08G41260
I
0.934
GLYMA18G15020
Glycine max
GLYMA18G15020
I
0.934
GSMUA_Achr6G02680_001
Musa acuminata
GSMUA_Achr6G02680_001
I
0.934
GSMUA_Achr7G00860_001
Musa acuminata
GSMUA_Achr7G00860_001
I
0.934
Traes_5BL_2131D2B17
Triticum aestivum
Traes_5BL_2131D2B17
I
0.934
cassava45330.m1
Manihot esculenta
cassava45330.m1
I
0.934
Aquca_002_00586
Aquilegia coerulea
Aquca_002_00586
I
0.934
Lus10007263.g
Linum usitatissimum
Lus10007263.g
I
0.934
MLOC_60079
Hordeum vulgare
MLOC_60079
I
0.933
MTR_8g467490
Medicago truncatula
MTR_8g467490
I
0.933
Solyc02g069960.2
Solanum lycopersicum
Solyc02g069960.2
I
0.933
anac094
Vitis vinifera
VIT_14s0108g00860
I
0.933
29813.m001479
Ricinus communis
29813.m001479
I
0.933
cassava38350.m1
Manihot esculenta
cassava38350.m1
I
0.933
Ciclev10031623m.g
Citrus clementina
Ciclev10031623m.g
I
0.933
Gorai.004G270400
Gossypium raimondii
Gorai.004G270400
I
0.933
SapurV1A.0552s0060
Salix purpurea
SapurV1A.0552s0060
I
0.933
BRADI3G37067
Brachypodium distachyon
BRADI3G37067
I
0.932
TRIUR3_04556
Triticum urartu
TRIUR3_04556
I
0.932
Ca_18749
Cicer arietinum
Ca_18749
I
0.932
Cucsa.285120
Cucumis sativus
Cucsa.285120
I
0.932
Gorai.005G141200
Gossypium raimondii
Gorai.005G141200
I
0.932
Gorai.006G017700
Gossypium raimondii
Gorai.006G017700
I
0.932
GLYMA13G05350
Glycine max
GLYMA13G05350
I
0.931
GLYMA19G02580
Glycine max
GLYMA19G02580
I
0.931
cassava39074.m1
Manihot esculenta
cassava39074.m1
I
0.931
evm.TU.supercontig_128.20
Carica papaya
evm.TU.supercontig_128.20
I
0.931
Lus10036749.g
Linum usitatissimum
Lus10036749.g
I
0.931
Lus10037178.g
Linum usitatissimum
Lus10037178.g
I
0.931
MDP0000241821
Malus domestica
MDP0000241821
I
0.931
PK01104.1
Cannabis sativa
PK01104.1
I
0.931
GLYMA01G05680
Glycine max
GLYMA01G05680
I
0.930
GLYMA02G11900
Glycine max
GLYMA02G11900
I
0.930
PGSC0003DMG400021119
Solanum tuberosum
PGSC0003DMG400021119
I
0.930
Traes_2BS_3B6ABF5E6
Triticum aestivum
Traes_2BS_3B6ABF5E6
I
0.930
Eucgr.G02506
Eucalyptus grandis
Eucgr.G02506
I
0.930
MDP0000186765
Malus domestica
MDP0000186765
I
0.930
orange1.1g047852m.g
Citrus sinensis
orange1.1g047852m.g
I
0.930
TCM_018508
Theobroma cacao
TCM_018508
I
0.929
Ca_15236
Cicer arietinum
Ca_15236
I
0.929
Cucsa.118320
Cucumis sativus
Cucsa.118320
I
0.929
PRUPE_ppa022278mg
Prunus persica
PRUPE_ppa022278mg
I
0.928
Cla010347
Citrullus lanatus
Cla010347
I
0.928
Pm006506
Prunus mume
Pm006506
I
0.928
PK18158.1
Cannabis sativa
PK18158.1
I
0.928
Bo8g076410
Brassica oleracea
Bo8g076410
I
0.927
Traes_2BS_2244C64CC
Triticum aestivum
Traes_2BS_2244C64CC
I
0.927
VIT_19s0027g00880
Vitis vinifera
VIT_19s0027g00880
I
0.927
FEZ
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1002274
I
0.925
Bra016294
Brassica rapa
Bra016294
I
0.924
Traes_2AS_C73DE621D
Triticum aestivum
Traes_2AS_C73DE621D
I
0.924
F775_23219
Aegilops tauschii
F775_23219
I
0.923
Traes_2DS_8C3F6A558
Triticum aestivum
Traes_2DS_8C3F6A558
I
0.923
cassava21730.m1
Manihot esculenta
cassava21730.m1
I
0.923
Bostr.12659s0312
Boechera stricta
Bostr.12659s0312
I
0.923
Gorai.013G085000
Gossypium raimondii
Gorai.013G085000
I
0.923
FEZ
Arabidopsis thaliana
AT1G26870
I
0.922
Cagra.1150s0013
Capsella grandiflora
Cagra.1150s0013
I
0.922
Carubv10011253m.g
Capsella rubella
Carubv10011253m.g
I
0.922
F775_22220
Aegilops tauschii
F775_22220
I
0.921
Traes_2DS_E2F2E9EAF
Triticum aestivum
Traes_2DS_E2F2E9EAF
I
0.921
Gorai.004G270300
Gossypium raimondii
Gorai.004G270300
I
0.921
SapurV1A.2065s0010
Salix purpurea
SapurV1A.2065s0010
I
0.921
SapurV1A.2645s0010
Salix purpurea
SapurV1A.2645s0010
I
0.921
PDK_20s1311871g001
Phoenix dactylifera
PDK_20s1311871g001
I
0.921
Thhalv10007709m.g
Eutrema salsugineum
Thhalv10007709m.g
I
0.920
GLYMA18G13574
Glycine max
GLYMA18G13574
I
0.919
MDP0000428265
Malus domestica
MDP0000428265
I
0.919
mgf019629m
Mimulus guttatus
mgf019629m
N
0.917
SapurV1A.0076s0070
Salix purpurea
SapurV1A.0076s0070
I
0.917
Bo5g045190
Brassica oleracea
Bo5g045190
I
0.916
Bra024677
Brassica rapa
Bra024677
I
0.916
Si036447m.g
Setaria italica
Si036447m.g
I
0.916
Pm011037
Prunus mume
Pm011037
I
0.916
Bo4g018490
Brassica oleracea
Bo4g018490
I
0.914
Thhalv10019631m.g
Eutrema salsugineum
Thhalv10019631m.g
I
0.914
PRUPE_ppa026843mg
Prunus persica
PRUPE_ppa026843mg
I
0.913
Cucsa.239650
Cucumis sativus
Cucsa.239650
N
0.913
Thhalv10017054m.g
Eutrema salsugineum
Thhalv10017054m.g
I
0.913
GSMUA_Achr5G02170_001
Musa acuminata
GSMUA_Achr5G02170_001
I
0.912
Cla023594
Citrullus lanatus
Cla023594
I
0.912
Cagra.8367s0003
Capsella grandiflora
Cagra.8367s0003
I
0.912
TRIUR3_04557
Triticum urartu
TRIUR3_04557
I
0.911
Bo6g109250
Brassica oleracea
Bo6g109250
I
0.910
GLYMA08G41995
Glycine max
GLYMA08G41995
I
0.910
Gorai.012G054800
Gossypium raimondii
Gorai.012G054800
I
0.910
Eucgr.K01228
Eucalyptus grandis
Eucgr.K01228
I
0.909
gene30051-v1.0-hybrid
Fragaria vesca
gene30051-v1.0-hybrid
N
0.908
AMTR_s00032p00126420
Amborella trichopoda
AMTR_s00032p00126420
I
0.906
Bra004403
Brassica rapa
Bra004403
I
0.905
LPERR03G30390
Leersia perrieri
LPERR03G30390
I
0.905
POPTR_0001s11660
Populus trichocarpa
POPTR_0001s11660
I
0.905
evm.TU.supercontig_67.60
Carica papaya
evm.TU.supercontig_67.60
N
0.905
SapurV1A.0094s0540
Salix purpurea
SapurV1A.0094s0540
I
0.905
GSMUA_Achr4G32010_001
Musa acuminata
GSMUA_Achr4G32010_001
I
0.904
Pavir.J03639
Panicum virgatum
Pavir.J03639
I
0.904
Pavir.J26531
Panicum virgatum
Pavir.J26531
I
0.904
Bo6g064260
Brassica oleracea
Bo6g064260
I
0.903
MTR_5g090970
Medicago truncatula
MTR_5g090970
I
0.903
PGSC0003DMG400039898
Solanum tuberosum
PGSC0003DMG400039898
I
0.903
Carubv10021514m.g
Capsella rubella
Carubv10021514m.g
I
0.903
BRADI1G58057
Brachypodium distachyon
BRADI1G58057
I
0.902
GRMZM2G112548
Zea mays
GRMZM2G112548
I
0.900
GSMUA_Achr6G31580_001
Musa acuminata
GSMUA_Achr6G31580_001
I
0.900
OB03G42970
Oryza brachyantha
OB03G42970
I
0.900
TCM_032389
Theobroma cacao
TCM_032389
N
0.900
VIT_19s0027g00910
Vitis vinifera
VIT_19s0027g00910
I
0.898
Thhalv10027860m.g
Eutrema salsugineum
Thhalv10027860m.g
I
0.898
anac094
Arabidopsis lyrata
Al_scaffold_0007_3733
I
0.897
F775_01324
Aegilops tauschii
F775_01324
I
0.897
Bostr.10058s0013
Boechera stricta
Bostr.10058s0013
I
0.897
Cagra.5905s0003
Capsella grandiflora
Cagra.5905s0003
I
0.897
Carubv10006906m.g
Capsella rubella
Carubv10006906m.g
I
0.897
Gorai.004G270200
Gossypium raimondii
Gorai.004G270200
N
0.896
Lus10030478.g
Linum usitatissimum
Lus10030478.g
I
0.894
ANAC094
Arabidopsis thaliana
AT5G39820
D
0.893
LPERR12G16500
Leersia perrieri
LPERR12G16500
N
0.892
Bra028441
Brassica rapa
Bra028441
I
0.891
OBART03G36060
Oryza barthii
OBART03G36060
I
0.890
OGLUM03G35790
Oryza glumaepatula
OGLUM03G35790
I
0.890
OMERI03G33230
Oryza meridionalis
OMERI03G33230
I
0.890
OPUNC03G33030
Oryza punctata
OPUNC03G33030
I
0.890
ORGLA03G0330500
Oryza glaberrima
ORGLA03G0330500
I
0.890
Cucsa.265620
Cucumis sativus
Cucsa.265620
I
0.890
Solyc07g045030.2
Solanum lycopersicum
Solyc07g045030.2
I
0.889
Sb01g006410
Sorghum bicolor
Sb01g006410
I
0.887
GSMUA_Achr10G08120_001
Musa acuminata
GSMUA_Achr10G08120_001
I
0.886
TRIUR3_04558
Triticum urartu
TRIUR3_04558
N
0.886
BGIOSGA013656
Oryza indica
BGIOSGA013656
I
0.882
ONIVA10G12510
Oryza nivara
ONIVA10G12510
I
0.882
ORUFI03G37500
Oryza rufipogon
ORUFI03G37500
I
0.882
OS03G0777000
Oryza sativa
OS03G0777000
I
0.882
MDP0000216714
Malus domestica
MDP0000216714
I
0.880
GSMUA_Achr10G08420_001
Musa acuminata
GSMUA_Achr10G08420_001
N
0.877
Cla003401
Citrullus lanatus
Cla003401
I
0.876
Si030477m.g
Setaria italica
Si030477m.g
N
0.874
F775_15555
Aegilops tauschii
F775_15555
N
0.871
OPUNC12G17870
Oryza punctata
OPUNC12G17870
I
0.871