CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
POPTR_0012s00760
(
Populus trichocarpa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
POPTR_0012s00760
T295304_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0012s00760.1
NAC/NAM
12
138
PLGFRFRPSDEELVNYYLRHKINGKDDKVRVIREIDVCKWEPWDLPGLSIIENKDPEWFFFCPLDRKYPNGSRQNRATNAGYWKATGKDRKIKSGNRLIGMKKTLVFYTGRAPKGKRTNWVVHEYRA
Links
Other
NAC/NAM
family TFs
Other
Populus trichocarpa
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0662s0040
Salix purpurea
SapurV1A.0662s0040
N
0.933
SapurV1A.2735s0030
Salix purpurea
SapurV1A.2735s0030
N
0.933
cassava11768.valid.m1
Manihot esculenta
cassava11768.valid.m1
N
0.925
29764.m000758
Ricinus communis
29764.m000758
N
0.919
POPTR_0015s00640
Populus trichocarpa
POPTR_0015s00640
N
0.915
SapurV1A.0666s0060
Salix purpurea
SapurV1A.0666s0060
N
0.902
SapurV1A.0285s0090
Salix purpurea
SapurV1A.0285s0090
I
0.891
SapurV1A.0326s0320
Salix purpurea
SapurV1A.0326s0320
N
0.889
Cucsa.273280
Cucumis sativus
Cucsa.273280
N
0.884
Cla002432
Citrullus lanatus
Cla002432
N
0.880
GLYMA04G40450
Glycine max
GLYMA04G40450
N
0.879
Lus10032919.g
Linum usitatissimum
Lus10032919.g
I
0.878
Gorai.004G125900
Gossypium raimondii
Gorai.004G125900
I
0.872
Gorai.003G073300
Gossypium raimondii
Gorai.003G073300
I
0.871