CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Sb02g043270
(
Sorghum bicolor
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Sb02g043270
T295518_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb02g043270.1
NAC/NAM
24
149
PPGFRFHPTDEEVVSHYLTHKALNSSFSCLVIADVDLNKIEPWDLPSKAKMGEKEWYFFCHKDRKYPTGMRTNRATASGYWKATGKDKEIFRGHRVLVGMKKTLVFYTGRAPHGGKTPWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Sorghum bicolor
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_15511
Aegilops tauschii
F775_15511
N
0.959
GRMZM2G181605
Zea mays
GRMZM2G181605
N
0.959
MLOC_65400
Hordeum vulgare
MLOC_65400
N
0.959
Traes_2AS_7AAACC26B
Triticum aestivum
Traes_2AS_7AAACC26B
N
0.959
Traes_2BS_00566A85C
Triticum aestivum
Traes_2BS_00566A85C
N
0.959
TRIUR3_20284
Triticum urartu
TRIUR3_20284
N
0.959
LPERR07G23450
Leersia perrieri
LPERR07G23450
N
0.941
OB07G32150
Oryza brachyantha
OB07G32150
N
0.939
BGIOSGA023698
Oryza indica
BGIOSGA023698
N
0.936
OBART07G26650
Oryza barthii
OBART07G26650
N
0.936
OGLUM07G26690
Oryza glumaepatula
OGLUM07G26690
N
0.936
OLONG_007532
Oryza longistaminata
OLONG_007532
N
0.936
OMERI07G23300
Oryza meridionalis
OMERI07G23300
N
0.936
ONIVA07G26420
Oryza nivara
ONIVA07G26420
N
0.936
ORGLA07G0210900
Oryza glaberrima
ORGLA07G0210900
N
0.936
ORUFI07G27640
Oryza rufipogon
ORUFI07G27640
N
0.936
OS07G0684800
Oryza sativa
OS07G0684800
N
0.936
Pavir.Bb03733
Panicum virgatum
Pavir.Bb03733
N
0.936
Pavir.Ba00246
Panicum virgatum
Pavir.Ba00246
N
0.935
BRADI1G17440
Brachypodium distachyon
BRADI1G17440
N
0.933
OPUNC07G25090
Oryza punctata
OPUNC07G25090
N
0.932
Traes_2AS_5466FDAF8
Triticum aestivum
Traes_2AS_5466FDAF8
N
0.927
TRIUR3_24774
Triticum urartu
TRIUR3_24774
N
0.927
Traes_2AS_759EDDA47
Triticum aestivum
Traes_2AS_759EDDA47
N
0.920
Traes_2DS_291916365
Triticum aestivum
Traes_2DS_291916365
N
0.920
TRIUR3_24111
Triticum urartu
TRIUR3_24111
N
0.920
BGIOSGA010816
Oryza indica
BGIOSGA010816
N
0.917
OBART03G15920
Oryza barthii
OBART03G15920
N
0.917
OGLUM03G16080
Oryza glumaepatula
OGLUM03G16080
N
0.917
OLONG_022063
Oryza longistaminata
OLONG_022063
N
0.917
ONIVA03G16900
Oryza nivara
ONIVA03G16900
N
0.917
ORGLA03G0152400
Oryza glaberrima
ORGLA03G0152400
N
0.917
ORUFI03G16480
Oryza rufipogon
ORUFI03G16480
N
0.917
OS03G0327100
Oryza sativa
OS03G0327100
N
0.917
LPERR03G13930
Leersia perrieri
LPERR03G13930
N
0.912
GRMZM2G031001
Zea mays
GRMZM2G031001
I
0.894
GRMZM2G159500
Zea mays
GRMZM2G159500
I
0.892
GSMUA_Achr8G21470_001
Musa acuminata
GSMUA_Achr8G21470_001
I
0.892
Pavir.J13094
Panicum virgatum
Pavir.J13094
I
0.891
GSMUA_Achr3G18020_001
Musa acuminata
GSMUA_Achr3G18020_001
N
0.890
Sb01g036590
Sorghum bicolor
Sb01g036590
I
0.889
MLOC_65714
Hordeum vulgare
MLOC_65714
N
0.883
Pavir.Ib01526
Panicum virgatum
Pavir.Ib01526
I
0.881
OMERI03G14250
Oryza meridionalis
OMERI03G14250
N
0.879
F775_29256
Aegilops tauschii
F775_29256
I
0.877
Traes_4DL_D84567626
Triticum aestivum
Traes_4DL_D84567626
I
0.877
BRADI1G63630
Brachypodium distachyon
BRADI1G63630
I
0.875
MLOC_64057
Hordeum vulgare
MLOC_64057
N
0.873
Traes_4BL_B92B51F5D
Triticum aestivum
Traes_4BL_B92B51F5D
I
0.873
OPUNC03G15440
Oryza punctata
OPUNC03G15440
N
0.872