CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Sb03g008860
(
Sorghum bicolor
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Sb03g008860
T295522_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb03g008860.1
NAC/NAM
23
151
PPGFRFHPSDIEIISDYLMNKVRNTNFTCIAIGEVDVNKTEPWDLPDQAKWGEKEWYFFNQKDRKYPTGLRANRATKAGYWKATGKDKEVYKTTEGVLMLVGMKKTLVFYKGRAPRGDKTNWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Sorghum bicolor
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_29497
Aegilops tauschii
F775_29497
I
0.923
Traes_7AS_7A7A0CF5B
Triticum aestivum
Traes_7AS_7A7A0CF5B
I
0.923
Traes_7BS_BA1111780
Triticum aestivum
Traes_7BS_BA1111780
N
0.923
Traes_7DS_2452C1E32
Triticum aestivum
Traes_7DS_2452C1E32
I
0.923
TRIUR3_25136
Triticum urartu
TRIUR3_25136
I
0.923
GRMZM2G154182
Zea mays
GRMZM2G154182
N
0.920
Pavir.Bb02033
Panicum virgatum
Pavir.Bb02033
I
0.904
MLOC_58272
Hordeum vulgare
MLOC_58272
N
0.901
Sb02g023960
Sorghum bicolor
Sb02g023960
N
0.894
Traes_7AS_CB673ED0C
Triticum aestivum
Traes_7AS_CB673ED0C
N
0.893
MTR_7g085260
Medicago truncatula
MTR_7g085260
I
0.889
Pavir.Ba02955
Panicum virgatum
Pavir.Ba02955
I
0.889
GLYMA16G04720
Glycine max
GLYMA16G04720
I
0.888
Traes_5AL_373E730BB
Triticum aestivum
Traes_5AL_373E730BB
I
0.888
GLYMA19G28515
Glycine max
GLYMA19G28515
I
0.884
GRMZM2G062650
Zea mays
GRMZM2G062650
N
0.883
F775_16032
Aegilops tauschii
F775_16032
I
0.882
evm.TU.supercontig_594.1
Carica papaya
evm.TU.supercontig_594.1
I
0.882
F775_13622
Aegilops tauschii
F775_13622
N
0.880
Traes_3DS_3520D86D7
Triticum aestivum
Traes_3DS_3520D86D7
N
0.880
Traes_5BL_59AFA4B01
Triticum aestivum
Traes_5BL_59AFA4B01
I
0.879
Pavir.Eb00839
Panicum virgatum
Pavir.Eb00839
I
0.876
Pavir.Eb00976
Panicum virgatum
Pavir.Eb00976
I
0.876
chr1.CM0104.260.nc
Lotus japonicus
chr1.CM0104.260.nc
I
0.876
TRAES3BF020100120CFD_g
Triticum aestivum
TRAES3BF020100120CFD_g
I
0.875
Ca_08255
Cicer arietinum
Ca_08255
I
0.875
Pavir.J27836
Panicum virgatum
Pavir.J27836
N
0.875
Ciclev10020549m.g
Citrus clementina
Ciclev10020549m.g
I
0.874
Gorai.013G118000
Gossypium raimondii
Gorai.013G118000
I
0.874
orange1.1g016542m.g
Citrus sinensis
orange1.1g016542m.g
I
0.874