CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb06g017190
(
Sorghum bicolor
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Sb06g017190
T295559_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb06g017190.1
NAC/NAM
11
129
PPGFHFFPSDEELVVHFLRRKASLLPCQPDIVPTVCMNHYDPWELNGKALGAGNQWYFFSHAKHSRVTPNGYWSSVCADETVSSGGCSVGLKKTLVFSTGEPSESEGTETNWIMHEYHL
Sb06g017190.2
NAC/NAM
11
129
PPGFHFFPSDEELVVHFLRRKASLLPCQPDIVPTVCMNHYDPWELNGKALGAGNQWYFFSHAKHSRVTPNGYWSSVCADETVSSGGCSVGLKKTLVFSTGEPSESEGTETNWIMHEYHL
Links
Other
NAC/NAM
family TFs
Other
Sorghum bicolor
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J14631
Panicum virgatum
Pavir.J14631
N
0.993
GRMZM2G316840
Zea mays
GRMZM2G316840
N
0.990
Si011079m.g
Setaria italica
Si011079m.g
N
0.989
Pavir.Ga01785
Panicum virgatum
Pavir.Ga01785
N
0.989
BGIOSGA016453
Oryza indica
BGIOSGA016453
N
0.986
OBART04G13350
Oryza barthii
OBART04G13350
N
0.986
OGLUM04G13190
Oryza glumaepatula
OGLUM04G13190
N
0.986
OLONG_015951
Oryza longistaminata
OLONG_015951
N
0.986
OMERI04G11960
Oryza meridionalis
OMERI04G11960
N
0.986
ORGLA04G0103800
Oryza glaberrima
ORGLA04G0103800
N
0.986
ORUFI04G14570
Oryza rufipogon
ORUFI04G14570
N
0.986
OS04G0437000
Oryza sativa
OS04G0437000
N
0.986
ONIVA04G11520
Oryza nivara
ONIVA04G11520
N
0.985
GSMUA_Achr6G17670_001
Musa acuminata
GSMUA_Achr6G17670_001
N
0.919
Pavir.Aa01694
Panicum virgatum
Pavir.Aa01694
N
0.914
Pavir.Ab01921
Panicum virgatum
Pavir.Ab01921
N
0.914
Pavir.J27766
Panicum virgatum
Pavir.J27766
N
0.911
Si018368m.g
Setaria italica
Si018368m.g
N
0.908
Sb04g022672
Sorghum bicolor
Sb04g022672
N
0.901
OB04G20560
Oryza brachyantha
OB04G20560
N
0.900
Pavir.Da00408
Panicum virgatum
Pavir.Da00408
N
0.899
LPERR04G10110
Leersia perrieri
LPERR04G10110
N
0.897