CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb10g000101
(
Sorghum bicolor
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Sb10g000101
T295596_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb10g000101.1
NAC/NAM
31
160
PVGFRFRPTDEELVRHYLKPKIAGHAHADLLLIPDVDLSACEPWELPAKALIRSGDPEWFFFAPLDRKYPGGHRSNRSTAAGYWKATGKDRLIRSRRAGTLIGVKKTLVFHRGRAPRGHRTAWIMHEYRT
Links
Other
NAC/NAM
family TFs
Other
Sorghum bicolor
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G163914
Zea mays
GRMZM2G163914
N
0.993
Si006105m.g
Setaria italica
Si006105m.g
N
0.993
GRMZM2G459156
Zea mays
GRMZM2G459156
N
0.990
BRADI1G52480
Brachypodium distachyon
BRADI1G52480
N
0.985
BGIOSGA022116
Oryza indica
BGIOSGA022116
N
0.981
OBART06G00060
Oryza barthii
OBART06G00060
N
0.981
OGLUM06G00040
Oryza glumaepatula
OGLUM06G00040
N
0.981
OLONG_004904
Oryza longistaminata
OLONG_004904
N
0.981
ONIVA06G00080
Oryza nivara
ONIVA06G00080
N
0.981
ORGLA06G0000500
Oryza glaberrima
ORGLA06G0000500
N
0.981
ORUFI06G00070
Oryza rufipogon
ORUFI06G00070
N
0.981
OS06G0101800
Oryza sativa
OS06G0101800
N
0.981
OPUNC06G00030
Oryza punctata
OPUNC06G00030
N
0.980
MLOC_75297
Hordeum vulgare
MLOC_75297
N
0.976
OMERI06G00050
Oryza meridionalis
OMERI06G00050
N
0.976
Traes_4AL_22CE41C6F
Triticum aestivum
Traes_4AL_22CE41C6F
N
0.976
LPERR06G00060
Leersia perrieri
LPERR06G00060
N
0.973
Traes_7AS_A6C843545
Triticum aestivum
Traes_7AS_A6C843545
N
0.958
GSMUA_Achr3G00330_001
Musa acuminata
GSMUA_Achr3G00330_001
I
0.955
GSMUA_AchrUn_randomG04060_001
Musa acuminata
GSMUA_AchrUn_randomG04060_001
I
0.954
Gorai.006G203800
Gossypium raimondii
Gorai.006G203800
I
0.945
BRADI3G16480
Brachypodium distachyon
BRADI3G16480
I
0.944
Si013369m.g
Setaria italica
Si013369m.g
I
0.943
Pavir.Fa01901
Panicum virgatum
Pavir.Fa01901
I
0.943
LPERR08G03510
Leersia perrieri
LPERR08G03510
I
0.941
OB08G13730
Oryza brachyantha
OB08G13730
I
0.941
OBART08G03460
Oryza barthii
OBART08G03460
I
0.940
OGLUM08G03540
Oryza glumaepatula
OGLUM08G03540
I
0.940
OLONG_000105
Oryza longistaminata
OLONG_000105
I
0.940
OMERI08G03500
Oryza meridionalis
OMERI08G03500
I
0.940
OPUNC08G03310
Oryza punctata
OPUNC08G03310
I
0.940
ORGLA08G0029000
Oryza glaberrima
ORGLA08G0029000
I
0.940
Pavir.Fb00405
Panicum virgatum
Pavir.Fb00405
I
0.940
F775_30082
Aegilops tauschii
F775_30082
I
0.939
MLOC_50406
Hordeum vulgare
MLOC_50406
I
0.939
Traes_7AL_669D4AE47
Triticum aestivum
Traes_7AL_669D4AE47
I
0.939
Traes_7BL_0C386426A
Triticum aestivum
Traes_7BL_0C386426A
I
0.939
Traes_7DL_AB67A0B36
Triticum aestivum
Traes_7DL_AB67A0B36
I
0.939
TRIUR3_32613
Triticum urartu
TRIUR3_32613
I
0.939
BGIOSGA027623
Oryza indica
BGIOSGA027623
I
0.938
ONIVA08G03440
Oryza nivara
ONIVA08G03440
I
0.938
ORUFI08G03870
Oryza rufipogon
ORUFI08G03870
I
0.938
OS08G0157900
Oryza sativa
OS08G0157900
I
0.938
Gorai.004G125900
Gossypium raimondii
Gorai.004G125900
I
0.931
Lus10015587.g
Linum usitatissimum
Lus10015587.g
I
0.930
Lus10032919.g
Linum usitatissimum
Lus10032919.g
I
0.930
Sb07g003900
Sorghum bicolor
Sb07g003900
I
0.927
BRADI4G34022
Brachypodium distachyon
BRADI4G34022
I
0.925
GRMZM2G003715
Zea mays
GRMZM2G003715
I
0.925
MTR_5g069030
Medicago truncatula
MTR_5g069030
I
0.915
TCM_015535
Theobroma cacao
TCM_015535
I
0.914
AMTR_s00018p00071850
Amborella trichopoda
AMTR_s00018p00071850
I
0.912
GLYMA14G36840
Glycine max
GLYMA14G36840
I
0.910
LPERR09G11150
Leersia perrieri
LPERR09G11150
N
0.910
VIT_15s0048g02320
Vitis vinifera
VIT_15s0048g02320
I
0.904
mgf022344m
Mimulus guttatus
mgf022344m
I
0.904
Ca_27204
Cicer arietinum
Ca_27204
I
0.902
Gorai.007G017500
Gossypium raimondii
Gorai.007G017500
I
0.900
MTR_8g023860
Medicago truncatula
MTR_8g023860
I
0.896
Pm019659
Prunus mume
Pm019659
I
0.894
GSMUA_Achr1G03560_001
Musa acuminata
GSMUA_Achr1G03560_001
I
0.890
GSMUA_Achr4G29170_001
Musa acuminata
GSMUA_Achr4G29170_001
I
0.886
VIT_15s0048g02300
Vitis vinifera
VIT_15s0048g02300
N
0.885
GSMUA_Achr11G07800_001
Musa acuminata
GSMUA_Achr11G07800_001
N
0.883
Bo5g002860
Brassica oleracea
Bo5g002860
N
0.882
evm.TU.supercontig_3.170
Carica papaya
evm.TU.supercontig_3.170
N
0.881
GSMUA_Achr2G11810_001
Musa acuminata
GSMUA_Achr2G11810_001
I
0.878
MTR_8g023930
Medicago truncatula
MTR_8g023930
I
0.878
MTR_8g023880
Medicago truncatula
MTR_8g023880
N
0.873
MTR_8g023840
Medicago truncatula
MTR_8g023840
I
0.871
Ca_04069
Cicer arietinum
Ca_04069
I
0.871