CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si030267m.g
(
Setaria italica
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Si030267m.g
T295775_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC018
M07176_2.00
Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH
Dap-seq
OMalley et al.(2016)
NAM_colamp_a
0.905
0.730
NAC018
M07177_2.00
Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW
Dap-seq
OMalley et al.(2016)
NAM_col_v3a
0.905
0.730
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si030267m
NAC/NAM
15
141
PPGFRFHPTDEELILHYLRNRAASAPCPVPIIADVDIYKFNPWDLPSKALYGDGEYYFFSPRDRKYPNGIRPNRAAGSGYWKATGTDKPIHDATTGESVGVKKALVFYEGRPPRGTKTNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Setaria italica
TFs
278 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy