VIT_13s0019g05240 (Vitis vinifera)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 VIT_13s0019g05240 T296415_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.909 0.763
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.909 0.763
NAC078
M02372_2.00 		Arabidopsis thaliana
NNRCAMGHMANN
NNTKDCKTGYNN		 PBM
Weirauch et al.(2014)
pTH7209 		0.894 0.860
NAC078
M07226_2.00 		Arabidopsis thaliana
TTDCTTGNDNNDCAAG
CTTGHNNHNCAAGHAA		 Dap-seq
OMalley et al.(2016)
NAC2_colamp_a 		0.894 0.860
NAC078
M07227_2.00 		Arabidopsis thaliana
DTTWCTTGNNNNRCAAG
CTTGYNNNNCAAGWAAH		 Dap-seq
OMalley et al.(2016)
NAC2_col_v3a 		0.894 0.860
NAC078
M11083_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC078_Q2 		0.894 0.860
NAC053
M07202_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAG
CTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_colamp_a 		0.877 0.833
NAC053
M07203_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAGH
DCTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_col 		0.877 0.833
NAC053
M11079_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G10500_Q2 		0.877 0.833
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_13s0019g05240.t01 NAC/NAM 10 136

Links

Other NAC/NAM family TFs
Other Vitis vinifera TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc05g055470.2 Solanum lycopersicum Solyc05g055470.2 I 0.926
Eucgr.J01038 Eucalyptus grandis Eucgr.J01038 I 0.926
PGSC0003DMG402023373 Solanum tuberosum PGSC0003DMG402023373 I 0.923
Cla020838 Citrullus lanatus Cla020838 I 0.921
Cucsa.308760 Cucumis sativus Cucsa.308760 I 0.917
GLYMA10G34130 Glycine max GLYMA10G34130 I 0.916
GLYMA20G33430 Glycine max GLYMA20G33430 I 0.916
SapurV1A.0213s0310 Salix purpurea SapurV1A.0213s0310 I 0.916
ANAC050 Arabidopsis thaliana AT3G10480 D 0.915
Ca_08371 Cicer arietinum Ca_08371 I 0.915
chr5.CM0909.750.nc Lotus japonicus chr5.CM0909.750.nc I 0.914
POPTR_0010s23630 Populus trichocarpa POPTR_0010s23630 I 0.912
Gorai.009G309300 Gossypium raimondii Gorai.009G309300 I 0.911
MTR_1g090720 Medicago truncatula MTR_1g090720 I 0.910
VIT_13s0019g05230 Vitis vinifera VIT_13s0019g05230 I 0.910
ANAC050 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000864 I 0.909
ANAC052 Arabidopsis lyrata fgenesh2_kg.3__1083__AT3G10490.2 I 0.909
cassava22912.valid.m1 Manihot esculenta cassava22912.valid.m1 I 0.909
Bostr.22252s0011 Boechera stricta Bostr.22252s0011 I 0.909
Bostr.22252s0012 Boechera stricta Bostr.22252s0012 I 0.909
Cagra.0834s0029 Capsella grandiflora Cagra.0834s0029 I 0.909
Carubv10013694m.g Capsella rubella Carubv10013694m.g I 0.909
Lus10037939.g Linum usitatissimum Lus10037939.g I 0.908
Lus10038670.g Linum usitatissimum Lus10038670.g I 0.908
LPERR08G20450 Leersia perrieri LPERR08G20450 I 0.907
OB08G30590 Oryza brachyantha OB08G30590 I 0.907
TCM_043357 Theobroma cacao TCM_043357 I 0.907
Gorai.012G007000 Gossypium raimondii Gorai.012G007000 I 0.905
Cagra.0834s0028 Capsella grandiflora Cagra.0834s0028 I 0.904
Cagra.9217s0021 Capsella grandiflora Cagra.9217s0021 I 0.904
Carubv10013564m.g Capsella rubella Carubv10013564m.g I 0.904
Thhalv10020717m.g Eutrema salsugineum Thhalv10020717m.g I 0.904
Thhalv10020745m.g Eutrema salsugineum Thhalv10020745m.g I 0.904
Sb07g023900 Sorghum bicolor Sb07g023900 I 0.903
F775_27564 Aegilops tauschii F775_27564 I 0.902
Si013361m.g Setaria italica Si013361m.g I 0.902
Traes_7BL_FB5FAC1E8 Triticum aestivum Traes_7BL_FB5FAC1E8 I 0.902
Traes_7DS_9FBF54244 Triticum aestivum Traes_7DS_9FBF54244 I 0.902
TRIUR3_33524 Triticum urartu TRIUR3_33524 I 0.902
mgf000623m Mimulus guttatus mgf000623m I 0.902
mgf004743m Mimulus guttatus mgf004743m I 0.902
Pavir.Fa00048 Panicum virgatum Pavir.Fa00048 I 0.902
Pavir.Fb02407 Panicum virgatum Pavir.Fb02407 I 0.902
Bo1g143830 Brassica oleracea Bo1g143830 I 0.899
Bo1g143840 Brassica oleracea Bo1g143840 I 0.898
Bra034119 Brassica rapa Bra034119 I 0.898
Bra034120 Brassica rapa Bra034120 I 0.898
PK06477.1 Cannabis sativa PK06477.1 I 0.898
Solyc11g008000.1 Solanum lycopersicum Solyc11g008000.1 I 0.896
NAC078 Arabidopsis thaliana AT5G04410 D 0.894
Bra028790 Brassica rapa Bra028790 I 0.894
NAC2 Arabidopsis lyrata scaffold_600382.1 I 0.894
Bostr.2128s0007 Boechera stricta Bostr.2128s0007 I 0.894
Ciclev10031606m.g Citrus clementina Ciclev10031606m.g I 0.894
orange1.1g014130m.g Citrus sinensis orange1.1g014130m.g I 0.894
ANAC052 Arabidopsis thaliana AT3G10490 I 0.893
Bo9g180050 Brassica oleracea Bo9g180050 I 0.893
Bra009456 Brassica rapa Bra009456 I 0.892
PGSC0003DMG400031071 Solanum tuberosum PGSC0003DMG400031071 N 0.892
Traes_6AL_8BA1FF8B2 Triticum aestivum Traes_6AL_8BA1FF8B2 I 0.889
BGIOSGA026481 Oryza indica BGIOSGA026481 I 0.888
OBART08G23760 Oryza barthii OBART08G23760 I 0.888
OGLUM08G25240 Oryza glumaepatula OGLUM08G25240 I 0.888
OLONG_023179 Oryza longistaminata OLONG_023179 I 0.888
OMERI08G18580 Oryza meridionalis OMERI08G18580 I 0.888
ONIVA08G26810 Oryza nivara ONIVA08G26810 I 0.888
OPUNC08G21700 Oryza punctata OPUNC08G21700 I 0.888
ORGLA08G0191600 Oryza glaberrima ORGLA08G0191600 I 0.888
ORUFI08G26250 Oryza rufipogon ORUFI08G26250 I 0.888
OS08G0562200 Oryza sativa OS08G0562200 I 0.888
Thhalv10013110m.g Eutrema salsugineum Thhalv10013110m.g I 0.888
BRADI3G12470 Brachypodium distachyon BRADI3G12470 I 0.886
Bra005804 Brassica rapa Bra005804 I 0.884
Bo3g002800 Brassica oleracea Bo3g002800 I 0.883
Bo1g143850 Brassica oleracea Bo1g143850 I 0.882
Bra034118 Brassica rapa Bra034118 I 0.882
Carubv10003768m.g Capsella rubella Carubv10003768m.g I 0.882
Gorai.011G234200 Gossypium raimondii Gorai.011G234200 I 0.882
BRADI3G56080 Brachypodium distachyon BRADI3G56080 I 0.881
MDP0000437676 Malus domestica MDP0000437676 I 0.881
Si016620m.g Setaria italica Si016620m.g I 0.880
Pavir.Aa00085 Panicum virgatum Pavir.Aa00085 I 0.880
Bo5g137360 Brassica oleracea Bo5g137360 I 0.879
Bra029844 Brassica rapa Bra029844 I 0.879
GRMZM2G113950 Zea mays GRMZM2G113950 I 0.878
Sb04g037720 Sorghum bicolor Sb04g037720 I 0.878
Eucgr.G02740 Eucalyptus grandis Eucgr.G02740 N 0.878
Pavir.Ab03009 Panicum virgatum Pavir.Ab03009 I 0.878
Thhalv10020438m.g Eutrema salsugineum Thhalv10020438m.g I 0.878
NAC053 Arabidopsis thaliana AT3G10500 D 0.877
anac053 Arabidopsis lyrata fgenesh2_kg.3__1085__AT3G10500.1 I 0.877
Solyc05g055480.2 Solanum lycopersicum Solyc05g055480.2 I 0.877
Bostr.22252s0010 Boechera stricta Bostr.22252s0010 I 0.877
Bra008980 Brassica rapa Bra008980 I 0.876
Cagra.0834s0027 Capsella grandiflora Cagra.0834s0027 I 0.876
Carubv10013370m.g Capsella rubella Carubv10013370m.g I 0.876
Cla020837 Citrullus lanatus Cla020837 I 0.875
Pm017547 Prunus mume Pm017547 I 0.875
Cucsa.308770 Cucumis sativus Cucsa.308770 I 0.875
GRMZM2G125777 Zea mays GRMZM2G125777 I 0.871