CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_18090
(
Cicer arietinum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Ca_18090
T296507_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC029
M00973_2.00
Arabidopsis thaliana
NBACGBMWNN
NNWKVCGTVN
PBM
Lindemose et al.(2014)
NAP
0.918
0.875
NAC029
M02369_2.00
Arabidopsis thaliana
NRGTCAWNN
NNWTGACYN
PBM
Weirauch et al.(2014)
pTH8397
0.918
0.875
NAC029
M07180_2.00
Arabidopsis thaliana
NCGTVHNNNWYACGBMA
TKVCGTRWNNNDBACGN
Dap-seq
OMalley et al.(2016)
NAP_colamp_a
0.918
0.875
NAC029
M07181_2.00
Arabidopsis thaliana
WYACGBMAYYD
HRRTKVCGTRW
Dap-seq
OMalley et al.(2016)
NAP_col_v3a
0.918
0.875
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_18090
NAC/NAM
10
134
PPGFRFHPTDEELIVYYLCNQATSQPCPASIIPEVDIYKFDPWELPDKSDFVENEWYFFSPRERKYPNGVRPNRATVSGYWKATGTDKSIFSGSKHIGVKKALVFYKGRPPKGLKTDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Cicer arietinum
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA01G06150
Glycine max
GLYMA01G06150
I
0.959
MTR_5g041940
Medicago truncatula
MTR_5g041940
I
0.958
GLYMA02G12220
Glycine max
GLYMA02G12220
I
0.957
Cla010367
Citrullus lanatus
Cla010367
I
0.951
Cucsa.284890
Cucumis sativus
Cucsa.284890
I
0.951
GLYMA20G04400
Glycine max
GLYMA20G04400
I
0.950
MTR_4g081870
Medicago truncatula
MTR_4g081870
I
0.948
Ca_16379
Cicer arietinum
Ca_16379
I
0.947
GLYMA07G35630
Glycine max
GLYMA07G35630
I
0.946
Gorai.008G179900
Gossypium raimondii
Gorai.008G179900
I
0.944
SapurV1A.0801s0090
Salix purpurea
SapurV1A.0801s0090
I
0.944
PK25119.1
Cannabis sativa
PK25119.1
I
0.944
POPTR_0008s08850
Populus trichocarpa
POPTR_0008s08850
I
0.943
NAP
Vitis vinifera
VIT_01s0026g02710
I
0.943
29813.m001519
Ricinus communis
29813.m001519
I
0.943
Gorai.005G142300
Gossypium raimondii
Gorai.005G142300
I
0.943
mgf022118m
Mimulus guttatus
mgf022118m
I
0.942
PGSC0003DMG400002824
Solanum tuberosum
PGSC0003DMG400002824
I
0.941
PRUPE_ppa009530mg
Prunus persica
PRUPE_ppa009530mg
I
0.941
Pm006470
Prunus mume
Pm006470
I
0.941
Eucgr.G02486
Eucalyptus grandis
Eucgr.G02486
I
0.941
MDP0000481448
Malus domestica
MDP0000481448
I
0.941
cassava1317.valid.m1
Manihot esculenta
cassava1317.valid.m1
I
0.940
Ciclev10032304m.g
Citrus clementina
Ciclev10032304m.g
I
0.940
orange1.1g023197m.g
Citrus sinensis
orange1.1g023197m.g
I
0.940
Lus10036773.g
Linum usitatissimum
Lus10036773.g
I
0.938
Solyc04g005610.2
Solanum lycopersicum
Solyc04g005610.2
I
0.937
TCM_011671
Theobroma cacao
TCM_011671
I
0.937
PGSC0003DMG400018435
Solanum tuberosum
PGSC0003DMG400018435
I
0.935
Lus10037156.g
Linum usitatissimum
Lus10037156.g
I
0.935
MDP0000262990
Malus domestica
MDP0000262990
I
0.935
POPTR_0010s17350
Populus trichocarpa
POPTR_0010s17350
I
0.929
Lus10026617.g
Linum usitatissimum
Lus10026617.g
I
0.929
Lus10030446.g
Linum usitatissimum
Lus10030446.g
I
0.929
Solyc05g007770.2
Solanum lycopersicum
Solyc05g007770.2
I
0.928
Aquca_002_00663
Aquilegia coerulea
Aquca_002_00663
I
0.927
mgf016848m
Mimulus guttatus
mgf016848m
I
0.924
chr2.CM0641.320.nc
Lotus japonicus
chr2.CM0641.320.nc
I
0.924
evm.TU.supercontig_1.48
Carica papaya
evm.TU.supercontig_1.48
I
0.920
NAC029
Arabidopsis thaliana
AT1G69490
D
0.918
Bo6g108930
Brassica oleracea
Bo6g108930
I
0.918
Bra004385
Brassica rapa
Bra004385
I
0.918
NAP
Arabidopsis lyrata
fgenesh2_kg.2__1206__AT1G69490.1
I
0.918
Bostr.10273s0418
Boechera stricta
Bostr.10273s0418
I
0.918
Cagra.0887s0008
Capsella grandiflora
Cagra.0887s0008
I
0.918
Carubv10020776m.g
Capsella rubella
Carubv10020776m.g
I
0.918
Thhalv10018997m.g
Eutrema salsugineum
Thhalv10018997m.g
I
0.918
SapurV1A.0063s0610
Salix purpurea
SapurV1A.0063s0610
I
0.915
SapurV1A.0063s0620
Salix purpurea
SapurV1A.0063s0620
I
0.915
Bo6g095510
Brassica oleracea
Bo6g095510
I
0.914
Eucgr.B03208
Eucalyptus grandis
Eucgr.B03208
I
0.898
GSMUA_Achr6G32320_001
Musa acuminata
GSMUA_Achr6G32320_001
I
0.887
OMERI12G00480
Oryza meridionalis
OMERI12G00480
I
0.880
Aquca_027_00052
Aquilegia coerulea
Aquca_027_00052
I
0.878
BGIOSGA034713
Oryza indica
BGIOSGA034713
I
0.877
BGIOSGA036918
Oryza indica
BGIOSGA036918
I
0.877
OBART11G01590
Oryza barthii
OBART11G01590
I
0.877
OBART12G01290
Oryza barthii
OBART12G01290
I
0.877
OGLUM11G01310
Oryza glumaepatula
OGLUM11G01310
I
0.877
OGLUM12G01870
Oryza glumaepatula
OGLUM12G01870
I
0.877
ONIVA11G01630
Oryza nivara
ONIVA11G01630
I
0.877
ORGLA12G0011400
Oryza glaberrima
ORGLA12G0011400
I
0.877
OS11G0126900
Oryza sativa
OS11G0126900
I
0.877
BGIOSGA036920
Oryza indica
BGIOSGA036920
I
0.874
OLONG_026749
Oryza longistaminata
OLONG_026749
I
0.874
OS12G0123700
Oryza sativa
OS12G0123700
I
0.874