CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm006470
(
Prunus mume
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pm006470
T296629_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC029
M00973_2.00
Arabidopsis thaliana
NBACGBMWNN
NNWKVCGTVN
PBM
Lindemose et al.(2014)
NAP
0.944
0.816
NAC029
M02369_2.00
Arabidopsis thaliana
NRGTCAWNN
NNWTGACYN
PBM
Weirauch et al.(2014)
pTH8397
0.944
0.816
NAC029
M07180_2.00
Arabidopsis thaliana
NCGTVHNNNWYACGBMA
TKVCGTRWNNNDBACGN
Dap-seq
OMalley et al.(2016)
NAP_colamp_a
0.944
0.816
NAC029
M07181_2.00
Arabidopsis thaliana
WYACGBMAYYD
HRRTKVCGTRW
Dap-seq
OMalley et al.(2016)
NAP_col_v3a
0.944
0.816
Traes_5BL_CC18CAD72
M11085_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC691_01
0.887
0.772
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm006470
NAC/NAM
10
134
PPGFRFHPTDEELIMFYLKNQATSRPCPVSIIPEVDLYKFDPWQLPEKAEFGENEWYFFTPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSGAKYVGVKKALVFYQGKPPKGVKSDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Prunus mume
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NAC029
Arabidopsis thaliana
AT1G69490
D
0.944
Traes_5BL_CC18CAD72
Triticum aestivum
Traes_5BL_CC18CAD72
D
0.887
mgf022118m
Mimulus guttatus
mgf022118m
I
0.966
evm.TU.supercontig_1.48
Carica papaya
evm.TU.supercontig_1.48
I
0.946
Eucgr.G02486
Eucalyptus grandis
Eucgr.G02486
I
0.963
Eucgr.B03208
Eucalyptus grandis
Eucgr.B03208
I
0.931
Ciclev10032304m.g
Citrus clementina
Ciclev10032304m.g
I
0.967
Carubv10020776m.g
Capsella rubella
Carubv10020776m.g
I
0.944
Cagra.0887s0008
Capsella grandiflora
Cagra.0887s0008
I
0.944
Bostr.10273s0418
Boechera stricta
Bostr.10273s0418
I
0.944
Aquca_002_00663
Aquilegia coerulea
Aquca_002_00663
I
0.944
Gorai.005G142300
Gossypium raimondii
Gorai.005G142300
I
0.964
mgf016848m
Mimulus guttatus
mgf016848m
I
0.946
Cucsa.284890
Cucumis sativus
Cucsa.284890
I
0.959
cassava1317.valid.m1
Manihot esculenta
cassava1317.valid.m1
I
0.965
29813.m001519
Ricinus communis
29813.m001519
I
0.966
Cla010367
Citrullus lanatus
Cla010367
I
0.959
Ca_18090
Cicer arietinum
Ca_18090
I
0.941
Ca_16379
Cicer arietinum
Ca_16379
I
0.942
NAP
Vitis vinifera
VIT_01s0026g02710
I
0.965
Gorai.008G179900
Gossypium raimondii
Gorai.008G179900
I
0.965
Lus10026617.g
Linum usitatissimum
Lus10026617.g
I
0.935
Lus10030446.g
Linum usitatissimum
Lus10030446.g
I
0.935
Lus10036773.g
Linum usitatissimum
Lus10036773.g
I
0.963
Lus10037156.g
Linum usitatissimum
Lus10037156.g
I
0.959
MDP0000262990
Malus domestica
MDP0000262990
I
0.966
MDP0000481448
Malus domestica
MDP0000481448
I
0.969
orange1.1g023197m.g
Citrus sinensis
orange1.1g023197m.g
I
0.967
Pavir.J23516
Panicum virgatum
Pavir.J23516
I
0.881
SapurV1A.0063s0610
Salix purpurea
SapurV1A.0063s0610
I
0.948
SapurV1A.0063s0620
Salix purpurea
SapurV1A.0063s0620
I
0.948
SapurV1A.0801s0090
Salix purpurea
SapurV1A.0801s0090
I
0.967
Thhalv10018997m.g
Eutrema salsugineum
Thhalv10018997m.g
I
0.944
PK25119.1
Cannabis sativa
PK25119.1
I
0.967
chr2.CM0641.320.nc
Lotus japonicus
chr2.CM0641.320.nc
I
0.898
OMERI12G00480
Oryza meridionalis
OMERI12G00480
I
0.876
Bo6g108930
Brassica oleracea
Bo6g108930
I
0.947
Bra004385
Brassica rapa
Bra004385
I
0.947
F775_26965
Aegilops tauschii
F775_26965
I
0.887
NAP
Arabidopsis lyrata
fgenesh2_kg.2__1206__AT1G69490.1
I
0.944
GLYMA01G06150
Glycine max
GLYMA01G06150
I
0.953
GLYMA02G12220
Glycine max
GLYMA02G12220
I
0.955
GLYMA07G35630
Glycine max
GLYMA07G35630
I
0.954
GLYMA20G04400
Glycine max
GLYMA20G04400
I
0.956
GSMUA_Achr6G32320_001
Musa acuminata
GSMUA_Achr6G32320_001
I
0.892
GSMUA_Achr7G21770_001
Musa acuminata
GSMUA_Achr7G21770_001
I
0.876
MLOC_4747
Hordeum vulgare
MLOC_4747
I
0.887
MTR_4g081870
Medicago truncatula
MTR_4g081870
I
0.955
MTR_5g041940
Medicago truncatula
MTR_5g041940
I
0.928
OB11G11210
Oryza brachyantha
OB11G11210
I
0.886
OB12G11500
Oryza brachyantha
OB12G11500
I
0.888
Bo6g095510
Brassica oleracea
Bo6g095510
I
0.935
OPUNC11G01330
Oryza punctata
OPUNC11G01330
I
0.893
OPUNC12G01370
Oryza punctata
OPUNC12G01370
I
0.893
PGSC0003DMG400002824
Solanum tuberosum
PGSC0003DMG400002824
I
0.964
PGSC0003DMG400018435
Solanum tuberosum
PGSC0003DMG400018435
I
0.964
POPTR_0008s08850
Populus trichocarpa
POPTR_0008s08850
I
0.965
POPTR_0010s17350
Populus trichocarpa
POPTR_0010s17350
I
0.940
PRUPE_ppa009530mg
Prunus persica
PRUPE_ppa009530mg
I
0.970
Sb05g001580
Sorghum bicolor
Sb05g001580
I
0.887
Sb08g001940
Sorghum bicolor
Sb08g001940
I
0.884
Si010410m.g
Setaria italica
Si010410m.g
I
0.888
Si026530m.g
Setaria italica
Si026530m.g
I
0.885
Solyc04g005610.2
Solanum lycopersicum
Solyc04g005610.2
I
0.950
Solyc05g007770.2
Solanum lycopersicum
Solyc05g007770.2
I
0.960
TCM_011671
Theobroma cacao
TCM_011671
I
0.952
AMTR_s00119p00040230
Amborella trichopoda
AMTR_s00119p00040230
I
0.874