CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm028720
(
Prunus mume
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pm028720
T296712_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm028720
NAC/NAM
11
143
LPGFRFYPTEEVLVGYYLKKKIEGKDSNFSHIIPEIDVCKHEPCDIPAFFEEPDFPDHEMEWFFFSQPDFKYTNSTRCNRATDQGFYKITGKVREIKARRSKAVIGKKRTLTFYEGRVPKAKKTDWIMHEYYL
Links
Other
NAC/NAM
family TFs
Other
Prunus mume
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa019865mg
Prunus persica
PRUPE_ppa019865mg
N
0.996
Pm028718
Prunus mume
Pm028718
N
0.995
PRUPE_ppa026972mg
Prunus persica
PRUPE_ppa026972mg
N
0.992
MDP0000249947
Malus domestica
MDP0000249947
N
0.986
MDP0000198108
Malus domestica
MDP0000198108
N
0.976
gene23394-v1.0-hybrid
Fragaria vesca
gene23394-v1.0-hybrid
N
0.960
PRUPE_ppa019780mg
Prunus persica
PRUPE_ppa019780mg
N
0.948
MDP0000291838
Malus domestica
MDP0000291838
N
0.946
MDP0000392668
Malus domestica
MDP0000392668
N
0.946
MDP0000136652
Malus domestica
MDP0000136652
N
0.933
MDP0000182344
Malus domestica
MDP0000182344
N
0.933
Pm028722
Prunus mume
Pm028722
I
0.922
Pm028721
Prunus mume
Pm028721
N
0.920
MDP0000836293
Malus domestica
MDP0000836293
N
0.916
PRUPE_ppa019241mg
Prunus persica
PRUPE_ppa019241mg
N
0.914
Pm018445
Prunus mume
Pm018445
N
0.908
Pm018442
Prunus mume
Pm018442
N
0.899
MDP0000138340
Malus domestica
MDP0000138340
N
0.894
MDP0000688878
Malus domestica
MDP0000688878
N
0.894
PRUPE_ppa023197mg
Prunus persica
PRUPE_ppa023197mg
N
0.891
Pm028723
Prunus mume
Pm028723
N
0.888
orange1.1g040419m.g
Citrus sinensis
orange1.1g040419m.g
N
0.883
VIT_15s0048g02300
Vitis vinifera
VIT_15s0048g02300
N
0.880
MTR_8g023860
Medicago truncatula
MTR_8g023860
I
0.879
PRUPE_ppa022384mg
Prunus persica
PRUPE_ppa022384mg
I
0.875
GRMZM2G003715
Zea mays
GRMZM2G003715
I
0.874
GSMUA_Achr3G00330_001
Musa acuminata
GSMUA_Achr3G00330_001
I
0.874
PRUPE_ppa024568mg
Prunus persica
PRUPE_ppa024568mg
N
0.872