CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava11768.valid.m1
(
Manihot esculenta
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
cassava11768.valid.m1
T296818_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava11768.valid.m1
NAC/NAM
10
136
PLGFRFRPTDEELVNFYLRLKINGNDEDVRVIRELDVCKWEPWDLPDLSIIKTKDQEWFFFCPLDRKYPNGHRLNRATSKGYWKATGKDRKIKSGNNLIGMKKTLVFYTGRAPRGTRTHWVIHEYRA
Links
Other
NAC/NAM
family TFs
Other
Manihot esculenta
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo3g109540
Brassica oleracea
Bo3g109540
I
0.902
Gorai.003G073300
Gossypium raimondii
Gorai.003G073300
I
0.895
Carubv10017199m.g
Capsella rubella
Carubv10017199m.g
I
0.873
Gorai.004G125900
Gossypium raimondii
Gorai.004G125900
I
0.872
Gorai.006G203800
Gossypium raimondii
Gorai.006G203800
I
0.909
Cagra.1838s0033
Capsella grandiflora
Cagra.1838s0033
I
0.873
Bostr.6864s0295
Boechera stricta
Bostr.6864s0295
I
0.874
Lus10015587.g
Linum usitatissimum
Lus10015587.g
I
0.929
Lus10032919.g
Linum usitatissimum
Lus10032919.g
I
0.940
SapurV1A.0285s0090
Salix purpurea
SapurV1A.0285s0090
I
0.886
VIT_16s0098g00760
Vitis vinifera
VIT_16s0098g00760
I
0.900
TCM_015535
Theobroma cacao
TCM_015535
I
0.901
ANAC062
Arabidopsis lyrata
scaffold_501948.1
I
0.876
orange1.1g007393m.g
Citrus sinensis
orange1.1g007393m.g
N
0.902
SapurV1A.0326s0320
Salix purpurea
SapurV1A.0326s0320
N
0.939
SapurV1A.0662s0040
Salix purpurea
SapurV1A.0662s0040
N
0.894
SapurV1A.0666s0060
Salix purpurea
SapurV1A.0666s0060
N
0.909
SapurV1A.2735s0030
Salix purpurea
SapurV1A.2735s0030
N
0.894
NAC091
Arabidopsis thaliana
AT5G24590
N
0.902
Thhalv10004105m.g
Eutrema salsugineum
Thhalv10004105m.g
N
0.903
gene12442-v1.0-hybrid
Fragaria vesca
gene12442-v1.0-hybrid
N
0.890
evm.TU.supercontig_3.170
Carica papaya
evm.TU.supercontig_3.170
N
0.909
Ciclev10019368m.g
Citrus clementina
Ciclev10019368m.g
N
0.902
Carubv10000892m.g
Capsella rubella
Carubv10000892m.g
N
0.903
Cagra.21346s0001
Capsella grandiflora
Cagra.21346s0001
N
0.902
Bostr.5763s0059
Boechera stricta
Bostr.5763s0059
N
0.874
Cucsa.273280
Cucumis sativus
Cucsa.273280
N
0.918
29764.m000758
Ricinus communis
29764.m000758
N
0.961
Cla002432
Citrullus lanatus
Cla002432
N
0.916
POPTR_0015s00640
Populus trichocarpa
POPTR_0015s00640
N
0.945
POPTR_0012s00760
Populus trichocarpa
POPTR_0012s00760
N
0.925
MTR_3g093040
Medicago truncatula
MTR_3g093040
N
0.901
GLYMA02G38710
Glycine max
GLYMA02G38710
N
0.893
ANAC091
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6001968
N
0.902