CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava33021.m1
(
Manihot esculenta
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
cassava33021.m1
T296887_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC043
M02370_2.00
Arabidopsis thaliana
NTTACGYWAN
NTWRCGTAAN
PBM
Weirauch et al.(2014)
pTH8161
0.957
0.930
NAC043
M07192_2.00
Arabidopsis thaliana
TRCKTVHDNHNYAMG
CKTRNDNHDBAMGYA
Dap-seq
OMalley et al.(2016)
NST1_colamp_a
0.957
0.930
NAC043
M07193_2.00
Arabidopsis thaliana
RCKTVHDNHNYAMGYWA
TWRCKTRNDNHDBAMGY
Dap-seq
OMalley et al.(2016)
NST1_col_v31
0.957
0.930
OS06G0131700
M02378_2.00
Oryza sativa
NNNNHMDNND
HNNHKDNNNN
PBM
Weirauch et al.(2014)
pTH8356
0.941
0.886
MDP0000762302
M02383_2.00
Malus domestica
NNNAMKHNWN
NWNDMKTNNN
PBM
Weirauch et al.(2014)
pTH9205
0.935
0.904
NAC012
M00971_2.00
Arabidopsis thaliana
NYAMGYHANN
NNTDRCKTRN
PBM
Lindemose et al.(2014)
SND1
0.930
0.895
NAC066
M00978_2.00
Arabidopsis thaliana
NBNNHNBNNN
NNNVNDNNVN
PBM
Lindemose et al.(2014)
NST2
0.925
0.886
SMB
M07184_2.00
Arabidopsis thaliana
TWNCKTVHDNHNYAMGYWAYH
DRTWRCKTRNDNHDBAMGNWA
Dap-seq
OMalley et al.(2016)
SMB_col_a
0.894
0.833
SMB
M07185_2.00
Arabidopsis thaliana
TWNCKTVNNNNNYAMG
CKTRNNNNNBAMGNWA
Dap-seq
OMalley et al.(2016)
SMB_colamp_a
0.894
0.833
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava33021.m1
NAC/NAM
16
143
PPGFRFHPTEEELLHYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSNGRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRI
Links
Other
NAC/NAM
family TFs
Other
Manihot esculenta
TFs
256 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
27964.m000369
Ricinus communis
27964.m000369
I
0.971
TCM_005047
Theobroma cacao
TCM_005047
I
0.969
Lus10030205.g
Linum usitatissimum
Lus10030205.g
I
0.969
AMTR_s00113p00077540
Amborella trichopoda
AMTR_s00113p00077540
I
0.968
GLYMA07G05660
Glycine max
GLYMA07G05660
I
0.968
GLYMA16G02200
Glycine max
GLYMA16G02200
I
0.968
MTR_8g024480
Medicago truncatula
MTR_8g024480
I
0.968
Ca_22425
Cicer arietinum
Ca_22425
I
0.968
Ca_22426
Cicer arietinum
Ca_22426
I
0.968
Cla006806
Citrullus lanatus
Cla006806
I
0.968
Cucsa.120870
Cucumis sativus
Cucsa.120870
I
0.968
Gorai.007G112500
Gossypium raimondii
Gorai.007G112500
I
0.968
LjSGA_027787.1
Lotus japonicus
LjSGA_027787.1
I
0.968
PRUPE_ppa020746mg
Prunus persica
PRUPE_ppa020746mg
I
0.967
Pm018292
Prunus mume
Pm018292
I
0.967
gene18636-v1.0-hybrid
Fragaria vesca
gene18636-v1.0-hybrid
I
0.967
Gorai.001G150800
Gossypium raimondii
Gorai.001G150800
I
0.967
MDP0000563165
Malus domestica
MDP0000563165
I
0.967
POPTR_0014s10060
Populus trichocarpa
POPTR_0014s10060
I
0.966
Lus10002687.g
Linum usitatissimum
Lus10002687.g
I
0.966
SapurV1A.0162s0220
Salix purpurea
SapurV1A.0162s0220
I
0.965
POPTR_0002s17950
Populus trichocarpa
POPTR_0002s17950
I
0.964
ANAC012
Vitis vinifera
VIT_02s0025g02710
I
0.964
VIT_15s0048g02660
Vitis vinifera
VIT_15s0048g02660
I
0.961
Ciclev10024035m.g
Citrus clementina
Ciclev10024035m.g
I
0.961
orange1.1g015853m.g
Citrus sinensis
orange1.1g015853m.g
I
0.961
GSMUA_Achr3G12230_001
Musa acuminata
GSMUA_Achr3G12230_001
I
0.958
Aquca_037_00272
Aquilegia coerulea
Aquca_037_00272
I
0.958
NAC043
Arabidopsis thaliana
AT2G46770
D
0.957
Bo4g006990
Brassica oleracea
Bo4g006990
I
0.957
Bra004509
Brassica rapa
Bra004509
I
0.957
GSMUA_Achr9G24450_001
Musa acuminata
GSMUA_Achr9G24450_001
I
0.957
NST1
Arabidopsis lyrata
scaffold_403649.1
I
0.957
Bostr.25993s0090
Boechera stricta
Bostr.25993s0090
I
0.957
Cagra.0050s0024
Capsella grandiflora
Cagra.0050s0024
I
0.957
Carubv10023503m.g
Capsella rubella
Carubv10023503m.g
I
0.957
Thhalv10001506m.g
Eutrema salsugineum
Thhalv10001506m.g
I
0.957
Bo4g197330
Brassica oleracea
Bo4g197330
I
0.956
Bra040486
Brassica rapa
Bra040486
I
0.956
PK04961.1
Cannabis sativa
PK04961.1
I
0.956
GSMUA_Achr7G05980_001
Musa acuminata
GSMUA_Achr7G05980_001
I
0.955
Cla011508
Citrullus lanatus
Cla011508
I
0.955
cassava32649.m1
Manihot esculenta
cassava32649.m1
I
0.955
Cucsa.193460
Cucumis sativus
Cucsa.193460
I
0.955
Gorai.008G130300
Gossypium raimondii
Gorai.008G130300
I
0.954
PDK_20s1408241g001
Phoenix dactylifera
PDK_20s1408241g001
I
0.954
mgf022455m
Mimulus guttatus
mgf022455m
I
0.953
SapurV1A.0003s0530
Salix purpurea
SapurV1A.0003s0530
I
0.953
GRMZM2G171395
Zea mays
GRMZM2G171395
I
0.952
Sb10g002120
Sorghum bicolor
Sb10g002120
I
0.952
Si006565m.g
Setaria italica
Si006565m.g
I
0.952
GSMUA_AchrUn_randomG21980_001
Musa acuminata
GSMUA_AchrUn_randomG21980_001
I
0.951
F775_11081
Aegilops tauschii
F775_11081
I
0.947
MLOC_66924
Hordeum vulgare
MLOC_66924
I
0.947
Traes_7AL_B000BC0DD
Triticum aestivum
Traes_7AL_B000BC0DD
I
0.947
Traes_7DL_1AD9A3E8D
Triticum aestivum
Traes_7DL_1AD9A3E8D
I
0.947
Cagra.0483s0052
Capsella grandiflora
Cagra.0483s0052
I
0.947
Carubv10019223m.g
Capsella rubella
Carubv10019223m.g
I
0.947
GRMZM2G069047
Zea mays
GRMZM2G069047
I
0.944
GRMZM2G092465
Zea mays
GRMZM2G092465
I
0.944
Sb07g001550
Sorghum bicolor
Sb07g001550
I
0.944
TCM_015621
Theobroma cacao
TCM_015621
I
0.944
30068.m002591
Ricinus communis
30068.m002591
I
0.944
cassava42638.valid.m1
Manihot esculenta
cassava42638.valid.m1
I
0.944
Ciclev10021141m.g
Citrus clementina
Ciclev10021141m.g
I
0.944
gene01881-v1.0-hybrid
Fragaria vesca
gene01881-v1.0-hybrid
I
0.944
Gorai.004G129200
Gossypium raimondii
Gorai.004G129200
I
0.944
orange1.1g014260m.g
Citrus sinensis
orange1.1g014260m.g
I
0.944
Pavir.J20698
Panicum virgatum
Pavir.J20698
I
0.944
Pavir.J21162
Panicum virgatum
Pavir.J21162
I
0.944
Bra003478
Brassica rapa
Bra003478
I
0.942
Bra007640
Brassica rapa
Bra007640
I
0.942
PRUPE_ppa006801mg
Prunus persica
PRUPE_ppa006801mg
I
0.942
Pm024260
Prunus mume
Pm024260
I
0.942
Bostr.13158s0196
Boechera stricta
Bostr.13158s0196
I
0.942
BGIOSGA022006
Oryza indica
BGIOSGA022006
I
0.941
BGIOSGA027883
Oryza indica
BGIOSGA027883
I
0.941
LPERR06G01790
Leersia perrieri
LPERR06G01790
I
0.941
LPERR08G01440
Leersia perrieri
LPERR08G01440
I
0.941
OB06G11970
Oryza brachyantha
OB06G11970
I
0.941
OB08G11290
Oryza brachyantha
OB08G11290
I
0.941
OBART06G01950
Oryza barthii
OBART06G01950
I
0.941
OBART08G01110
Oryza barthii
OBART08G01110
I
0.941
OGLUM06G01950
Oryza glumaepatula
OGLUM06G01950
I
0.941
OGLUM08G01180
Oryza glumaepatula
OGLUM08G01180
I
0.941
OMERI06G01850
Oryza meridionalis
OMERI06G01850
I
0.941
ONIVA06G02290
Oryza nivara
ONIVA06G02290
I
0.941
ONIVA08G01130
Oryza nivara
ONIVA08G01130
I
0.941
OPUNC06G01800
Oryza punctata
OPUNC06G01800
I
0.941
OPUNC08G01110
Oryza punctata
OPUNC08G01110
I
0.941
ORGLA06G0019800
Oryza glaberrima
ORGLA06G0019800
I
0.941
ORGLA08G0004900
Oryza glaberrima
ORGLA08G0004900
I
0.941
ORUFI06G01950
Oryza rufipogon
ORUFI06G01950
I
0.941
ORUFI08G01170
Oryza rufipogon
ORUFI08G01170
I
0.941
OS06G0131700
Oryza sativa
OS06G0131700
D
0.941
OS08G0115800
Oryza sativa
OS08G0115800
I
0.941
cassava45846.m1
Manihot esculenta
cassava45846.m1
I
0.941
Gorai.003G077700
Gossypium raimondii
Gorai.003G077700
I
0.941
Pavir.J07835
Panicum virgatum
Pavir.J07835
I
0.941
POPTR_0011s15640
Populus trichocarpa
POPTR_0011s15640
I
0.939
Eucgr.E01053
Eucalyptus grandis
Eucgr.E01053
I
0.939
SapurV1A.0131s0060
Salix purpurea
SapurV1A.0131s0060
I
0.939
OMERI08G01360
Oryza meridionalis
OMERI08G01360
I
0.938
PK22182.1
Cannabis sativa
PK22182.1
I
0.937
PGSC0003DMG400011268
Solanum tuberosum
PGSC0003DMG400011268
I
0.936
NST2
Arabidopsis lyrata
scaffold_503455.1
I
0.936
Solyc10g005010.2
Solanum lycopersicum
Solyc10g005010.2
I
0.936
MDP0000140229
Malus domestica
MDP0000140229
I
0.935
MDP0000762302
Malus domestica
MDP0000762302
D
0.935
Eucgr.D01671
Eucalyptus grandis
Eucgr.D01671
I
0.934
evm.TU.supercontig_37.89
Carica papaya
evm.TU.supercontig_37.89
I
0.934
Lus10001664.g
Linum usitatissimum
Lus10001664.g
I
0.933
Lus10017340.g
Linum usitatissimum
Lus10017340.g
I
0.933
Gorai.008G259700
Gossypium raimondii
Gorai.008G259700
I
0.932
POPTR_0001s45250
Populus trichocarpa
POPTR_0001s45250
I
0.931
SapurV1A.0941s0070
Salix purpurea
SapurV1A.0941s0070
I
0.931
SapurV1A.2717s0010
Salix purpurea
SapurV1A.2717s0010
I
0.931
NAC012
Arabidopsis thaliana
AT1G32770
D
0.930
ANAC012
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1002619
I
0.930
GSMUA_Achr2G20020_001
Musa acuminata
GSMUA_Achr2G20020_001
I
0.930
Cagra.14513s0001
Capsella grandiflora
Cagra.14513s0001
I
0.930
Carubv10011900m.g
Capsella rubella
Carubv10011900m.g
I
0.930
Thhalv10009336m.g
Eutrema salsugineum
Thhalv10009336m.g
I
0.930
Bo5g049360
Brassica oleracea
Bo5g049360
I
0.929
Bostr.3359s0081
Boechera stricta
Bostr.3359s0081
I
0.929
gene18635-v1.0-hybrid
Fragaria vesca
gene18635-v1.0-hybrid
I
0.929
GRMZM2G091490
Zea mays
GRMZM2G091490
I
0.928
GSMUA_Achr10G14400_001
Musa acuminata
GSMUA_Achr10G14400_001
I
0.928
Bra023288
Brassica rapa
Bra023288
I
0.927
BRADI3G13727
Brachypodium distachyon
BRADI3G13727
I
0.927
Aquca_030_00252
Aquilegia coerulea
Aquca_030_00252
I
0.927
Lus10008271.g
Linum usitatissimum
Lus10008271.g
I
0.927
Lus10033239.g
Linum usitatissimum
Lus10033239.g
I
0.927
Gorai.006G205300
Gossypium raimondii
Gorai.006G205300
I
0.926
NAC066
Arabidopsis thaliana
AT3G61910
D
0.925
AMTR_s00068p00207380
Amborella trichopoda
AMTR_s00068p00207380
I
0.924
Bo5g086900
Brassica oleracea
Bo5g086900
I
0.923
Bra010183
Brassica rapa
Bra010183
I
0.923
Bo6g079180
Brassica oleracea
Bo6g079180
I
0.922
GRMZM2G041746
Zea mays
GRMZM2G041746
I
0.917
GRMZM2G104074
Zea mays
GRMZM2G104074
I
0.917
Sb10g020860
Sorghum bicolor
Sb10g020860
I
0.917
LPERR02G09170
Leersia perrieri
LPERR02G09170
I
0.916
OB02G19660
Oryza brachyantha
OB02G19660
I
0.916
BRADI3G09520
Brachypodium distachyon
BRADI3G09520
I
0.915
F775_42361
Aegilops tauschii
F775_42361
I
0.915
MLOC_17128
Hordeum vulgare
MLOC_17128
I
0.915
Traes_7AL_46F73E667
Triticum aestivum
Traes_7AL_46F73E667
I
0.915
Traes_7DL_AD6EAD1A61
Triticum aestivum
Traes_7DL_AD6EAD1A61
I
0.915
Traes_7DL_AD6EAD1A6
Triticum aestivum
Traes_7DL_AD6EAD1A6
I
0.915
TRIUR3_14210
Triticum urartu
TRIUR3_14210
I
0.915
BRADI1G38730
Brachypodium distachyon
BRADI1G38730
I
0.914
Lus10009939.g
Linum usitatissimum
Lus10009939.g
I
0.914
Sb04g009180
Sorghum bicolor
Sb04g009180
I
0.913
Si007822m.g
Setaria italica
Si007822m.g
I
0.913
Pavir.Da01009
Panicum virgatum
Pavir.Da01009
I
0.913
Pavir.J05053
Panicum virgatum
Pavir.J05053
I
0.913
Lus10030143.g
Linum usitatissimum
Lus10030143.g
I
0.912
Si017641m.g
Setaria italica
Si017641m.g
I
0.911
Pavir.Aa02770
Panicum virgatum
Pavir.Aa02770
I
0.910
Pavir.Ab01037
Panicum virgatum
Pavir.Ab01037
I
0.910
PGSC0003DMG400012113
Solanum tuberosum
PGSC0003DMG400012113
I
0.907
evm.TU.supercontig_118.26
Carica papaya
evm.TU.supercontig_118.26
I
0.906
OPUNC02G09610
Oryza punctata
OPUNC02G09610
I
0.905
PK10271.1
Cannabis sativa
PK10271.1
I
0.900
BGIOSGA007898
Oryza indica
BGIOSGA007898
I
0.898
OBART02G10820
Oryza barthii
OBART02G10820
I
0.898
OGLUM02G10770
Oryza glumaepatula
OGLUM02G10770
I
0.898
OLONG_007664
Oryza longistaminata
OLONG_007664
I
0.898
ONIVA02G12010
Oryza nivara
ONIVA02G12010
I
0.898
ORGLA02G0097800
Oryza glaberrima
ORGLA02G0097800
I
0.898
PRUPE_ppa025341mg
Prunus persica
PRUPE_ppa025341mg
I
0.898
Ca_13929
Cicer arietinum
Ca_13929
I
0.898
Pm010886
Prunus mume
Pm010886
I
0.898
29725.m000235
Ricinus communis
29725.m000235
I
0.898
gene19898-v1.0-hybrid
Fragaria vesca
gene19898-v1.0-hybrid
I
0.898
Bo6g123980
Brassica oleracea
Bo6g123980
I
0.896
Bra035127
Brassica rapa
Bra035127
I
0.896
ORUFI02G10740
Oryza rufipogon
ORUFI02G10740
I
0.896
OS02G0252200
Oryza sativa
OS02G0252200
I
0.896
GSMUA_Achr10G21750_001
Musa acuminata
GSMUA_Achr10G21750_001
I
0.895
SMB
Arabidopsis thaliana
AT1G79580
D
0.894
Bo6g080930
Brassica oleracea
Bo6g080930
I
0.894
F775_21627
Aegilops tauschii
F775_21627
I
0.894
SMB
Arabidopsis lyrata
scaffold_202942.1
I
0.894
TRIUR3_14543
Triticum urartu
TRIUR3_14543
I
0.894
Bostr.20129s0396
Boechera stricta
Bostr.20129s0396
I
0.894
Cagra.1725s0032
Capsella grandiflora
Cagra.1725s0032
I
0.894
Carubv10020504m.g
Capsella rubella
Carubv10020504m.g
I
0.894
Thhalv10019534m.g
Eutrema salsugineum
Thhalv10019534m.g
I
0.894
GLYMA08G17140
Glycine max
GLYMA08G17140
I
0.893
MTR_2g062730
Medicago truncatula
MTR_2g062730
I
0.893
SMB
Vitis vinifera
VIT_19s0085g01210
I
0.893
cassava32687.m1
Manihot esculenta
cassava32687.m1
I
0.893
LjSGA_059487.1
Lotus japonicus
LjSGA_059487.1
I
0.893
TRIUR3_27911
Triticum urartu
TRIUR3_27911
I
0.892
Cla005561
Citrullus lanatus
Cla005561
I
0.892
Cucsa.240210
Cucumis sativus
Cucsa.240210
I
0.892
BGIOSGA021116
Oryza indica
BGIOSGA021116
I
0.890
LPERR06G14120
Leersia perrieri
LPERR06G14120
I
0.890
OB06G24850
Oryza brachyantha
OB06G24850
I
0.890
OBART06G17120
Oryza barthii
OBART06G17120
I
0.890
OGLUM06G18230
Oryza glumaepatula
OGLUM06G18230
I
0.890
OMERI06G17980
Oryza meridionalis
OMERI06G17980
I
0.890
ONIVA06G20460
Oryza nivara
ONIVA06G20460
I
0.890
OPUNC06G15490
Oryza punctata
OPUNC06G15490
I
0.890
ORUFI06G18140
Oryza rufipogon
ORUFI06G18140
I
0.890
OS06G0530400
Oryza sativa
OS06G0530400
I
0.890
POPTR_0008s07950
Populus trichocarpa
POPTR_0008s07950
I
0.890
POPTR_0010s18420
Populus trichocarpa
POPTR_0010s18420
I
0.890
TCM_033728
Theobroma cacao
TCM_033728
I
0.890
cassava39971.m1
Manihot esculenta
cassava39971.m1
I
0.890
Gorai.004G268500
Gossypium raimondii
Gorai.004G268500
I
0.890
SapurV1A.0093s0460
Salix purpurea
SapurV1A.0093s0460
I
0.890
SapurV1A.0164s0070
Salix purpurea
SapurV1A.0164s0070
I
0.890
Bo2g095440
Brassica oleracea
Bo2g095440
I
0.889
TRIUR3_14544
Triticum urartu
TRIUR3_14544
I
0.889
MDP0000501518
Malus domestica
MDP0000501518
I
0.889
MDP0000652584
Malus domestica
MDP0000652584
I
0.889
Bra003602
Brassica rapa
Bra003602
I
0.885
Bra008423
Brassica rapa
Bra008423
I
0.885
GLYMA19G44890
Glycine max
GLYMA19G44890
I
0.885
PGSC0003DMG400009665
Solanum tuberosum
PGSC0003DMG400009665
I
0.885
Solyc12g017400.1
Solanum lycopersicum
Solyc12g017400.1
I
0.885
Traes_4AL_3AFF9664B
Triticum aestivum
Traes_4AL_3AFF9664B
I
0.885
Traes_4AL_8FABAA6C3
Triticum aestivum
Traes_4AL_8FABAA6C3
I
0.885
TRIUR3_14545
Triticum urartu
TRIUR3_14545
I
0.885
mgf025569m
Mimulus guttatus
mgf025569m
I
0.884
Lus10032238.g
Linum usitatissimum
Lus10032238.g
I
0.884
GRMZM2G155816
Zea mays
GRMZM2G155816
I
0.883
GLYMA15G42050
Glycine max
GLYMA15G42050
I
0.882
mg017416m
Mimulus guttatus
mg017416m
I
0.880
Sb10g020850
Sorghum bicolor
Sb10g020850
I
0.878
BGIOSGA015018
Oryza indica
BGIOSGA015018
I
0.877
BGIOSGA034998
Oryza indica
BGIOSGA034998
I
0.877
GRMZM2G099144
Zea mays
GRMZM2G099144
I
0.877
OBART04G13830
Oryza barthii
OBART04G13830
I
0.877
OLONG_020428
Oryza longistaminata
OLONG_020428
I
0.877
ONIVA04G12040
Oryza nivara
ONIVA04G12040
I
0.877
Aquca_013_00692
Aquilegia coerulea
Aquca_013_00692
I
0.877
OB04G21050
Oryza brachyantha
OB04G21050
I
0.875
OGLUM04G13590
Oryza glumaepatula
OGLUM04G13590
I
0.875
ORUFI04G15090
Oryza rufipogon
ORUFI04G15090
I
0.875
Sb06g017720
Sorghum bicolor
Sb06g017720
I
0.875
Si012319m.g
Setaria italica
Si012319m.g
I
0.875
Pavir.Gb01599
Panicum virgatum
Pavir.Gb01599
I
0.875
Pavir.J07268
Panicum virgatum
Pavir.J07268
I
0.875
BRADI5G11247
Brachypodium distachyon
BRADI5G11247
I
0.872
F775_23174
Aegilops tauschii
F775_23174
I
0.872
MLOC_19175
Hordeum vulgare
MLOC_19175
I
0.872
Traes_2AL_F0B17F0EA
Triticum aestivum
Traes_2AL_F0B17F0EA
I
0.872
Traes_2BL_209C14A8F
Triticum aestivum
Traes_2BL_209C14A8F
I
0.872
Traes_2DL_70F83D4B9
Triticum aestivum
Traes_2DL_70F83D4B9
I
0.872
TRIUR3_32451
Triticum urartu
TRIUR3_32451
I
0.872
GLYMA19G44910
Glycine max
GLYMA19G44910
N
0.871
TRIUR3_28259
Triticum urartu
TRIUR3_28259
I
0.871