CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava39379.m1
(
Manihot esculenta
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
cassava39379.m1
T296905_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava39379.m1
NAC/NAM
4
134
NVGFRFHPTDEEIIGYYLKHKMNGKDSLVNHIIGEIDLCQCEPSDIPELCLISSNDKVWYFFNRPDYKYSNSKRANRMTRAGFWKITGKIRYVKAGDTGEEIGSKRSLVFYSKVHDSKPLRTNWVIHEYQS
Links
Other
NAC/NAM
family TFs
Other
Manihot esculenta
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0003s0330
Salix purpurea
SapurV1A.0003s0330
I
0.924
POPTR_0002s15560
Populus trichocarpa
POPTR_0002s15560
I
0.909
Lus10005143.g
Linum usitatissimum
Lus10005143.g
N
0.897
Lus10030175.g
Linum usitatissimum
Lus10030175.g
N
0.897
SapurV1A.0586s0170
Salix purpurea
SapurV1A.0586s0170
I
0.884
MDP0000575835
Malus domestica
MDP0000575835
I
0.883
SapurV1A.0321s0350
Salix purpurea
SapurV1A.0321s0350
I
0.878
POPTR_0014s10330
Populus trichocarpa
POPTR_0014s10330
I
0.877
PRUPE_ppa022384mg
Prunus persica
PRUPE_ppa022384mg
I
0.876
POPTR_0014s10350
Populus trichocarpa
POPTR_0014s10350
I
0.875
POPTR_0014s10360
Populus trichocarpa
POPTR_0014s10360
I
0.875
SapurV1A.0162s0450
Salix purpurea
SapurV1A.0162s0450
I
0.874
Bo9g004070
Brassica oleracea
Bo9g004070
I
0.871