cassava4505.m1 (Manihot esculenta)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 cassava4505.m1 T296921_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC002
M00970_2.00 		Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN		 PBM
Lindemose et al.(2014)
ATAF1 		0.946 0.619
NAC002
M07159_2.00 		Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM		 Dap-seq
OMalley et al.(2016)
ATAF1_col_a 		0.946 0.619
NAC002
M07160_2.00 		Arabidopsis thaliana
YACGY
RCGTR		 Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a 		0.946 0.619
NAC48
M11084_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC6_01 		0.930 0.584
AT3G12910
M07204_2.00 		Arabidopsis thaliana
YGSCGKNDNDDHNMCGB
VCGKNDHHNHNMCGSCR		 Dap-seq
OMalley et al.(2016)
AT3G12910_col_a 		0.891 0.513
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava4505.m1 NAC/NAM 12 140

Links

Other NAC/NAM family TFs
Other Manihot esculenta TFs

148 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_029796 Theobroma cacao TCM_029796 I 0.984
POPTR_0004s04920 Populus trichocarpa POPTR_0004s04920 I 0.975
Gorai.006G088400 Gossypium raimondii Gorai.006G088400 I 0.974
e_gw1.164.18.1 Physcomitrella patens e_gw1.164.18.1 I 0.951
SapurV1A.0365s0200 Salix purpurea SapurV1A.0365s0200 I 0.950
e_gw1.140.53.1 Physcomitrella patens e_gw1.140.53.1 I 0.949
SapurV1A.0740s0040 Salix purpurea SapurV1A.0740s0040 I 0.949
e_gw1.164.26.1 Physcomitrella patens e_gw1.164.26.1 I 0.948
SapurV1A.3767s0010 Salix purpurea SapurV1A.3767s0010 I 0.948
e_gw1.117.35.1 Physcomitrella patens e_gw1.117.35.1 I 0.947
NAC002 Arabidopsis thaliana AT1G01720 D 0.946
Bo5g001100 Brassica oleracea Bo5g001100 I 0.946
Bra033239 Brassica rapa Bra033239 I 0.946
GLYMA14G24220 Glycine max GLYMA14G24220 I 0.946
cassava28909.valid.m1 Manihot esculenta cassava28909.valid.m1 I 0.946
e_gw1.5.134.1 Physcomitrella patens e_gw1.5.134.1 I 0.946
Bostr.5325s0094 Boechera stricta Bostr.5325s0094 I 0.946
Cagra.1968s0112 Capsella grandiflora Cagra.1968s0112 I 0.946
Carubv10009926m.g Capsella rubella Carubv10009926m.g I 0.946
e_gw1.259.4.1 Physcomitrella patens e_gw1.259.4.1 I 0.945
anac032 Vitis vinifera VIT_18s0001g02300 I 0.943
GSMUA_Achr4G02390_001 Musa acuminata GSMUA_Achr4G02390_001 I 0.942
ATAF1 Arabidopsis lyrata scaffold_100066.1 I 0.942
mgf004020m Mimulus guttatus mgf004020m I 0.942
cassava39074.m1 Manihot esculenta cassava39074.m1 I 0.941
Aquca_014_00255 Aquilegia coerulea Aquca_014_00255 I 0.941
BGIOSGA018048 Oryza indica BGIOSGA018048 I 0.940
OBART05G16540 Oryza barthii OBART05G16540 I 0.940
OGLUM05G17550 Oryza glumaepatula OGLUM05G17550 I 0.940
ONIVA05G17220 Oryza nivara ONIVA05G17220 I 0.940
OPUNC05G14600 Oryza punctata OPUNC05G14600 I 0.940
ORGLA05G0143100 Oryza glaberrima ORGLA05G0143100 I 0.940
ORUFI05G17750 Oryza rufipogon ORUFI05G17750 I 0.940
OS05G0415400 Oryza sativa OS05G0415400 I 0.940
TCM_035160 Theobroma cacao TCM_035160 I 0.940
Gorai.010G051900 Gossypium raimondii Gorai.010G051900 I 0.940
PK26157.1 Cannabis sativa PK26157.1 I 0.939
GSMUA_Achr6G18720_001 Musa acuminata GSMUA_Achr6G18720_001 I 0.937
LPERR05G13490 Leersia perrieri LPERR05G13490 I 0.937
Gorai.005G088800 Gossypium raimondii Gorai.005G088800 I 0.937
GRMZM2G162739 Zea mays GRMZM2G162739 I 0.935
GRMZM2G079632 Zea mays GRMZM2G079632 I 0.934
Sb02g006680 Sorghum bicolor Sb02g006680 I 0.934
Solyc11g017470.1 Solanum lycopersicum Solyc11g017470.1 I 0.934
GSMUA_Achr7G21780_001 Musa acuminata GSMUA_Achr7G21780_001 I 0.933
Pavir.Ba03301 Panicum virgatum Pavir.Ba03301 I 0.933
Si030752m.g Setaria italica Si030752m.g I 0.932
Solyc04g009440.2 Solanum lycopersicum Solyc04g009440.2 I 0.932
LPERR07G06440 Leersia perrieri LPERR07G06440 I 0.931
Pavir.Bb00806 Panicum virgatum Pavir.Bb00806 I 0.931
BGIOSGA000374 Oryza indica BGIOSGA000374 I 0.930
BRADI2G57100 Brachypodium distachyon BRADI2G57100 I 0.930
LPERR01G34090 Leersia perrieri LPERR01G34090 I 0.930
OB01G48340 Oryza brachyantha OB01G48340 I 0.930
OBART01G39590 Oryza barthii OBART01G39590 I 0.930
OGLUM01G43820 Oryza glumaepatula OGLUM01G43820 I 0.930
OMERI01G36460 Oryza meridionalis OMERI01G36460 I 0.930
ONIVA01G44460 Oryza nivara ONIVA01G44460 I 0.930
OPUNC01G38300 Oryza punctata OPUNC01G38300 I 0.930
ORGLA01G0334900 Oryza glaberrima ORGLA01G0334900 I 0.930
ORUFI01G42940 Oryza rufipogon ORUFI01G42940 I 0.930
NAC48 Oryza sativa OS01G0884300 D 0.930
BGIOSGA019897 Oryza indica BGIOSGA019897 I 0.929
GRMZM2G014653 Zea mays GRMZM2G014653 I 0.929
OGLUM05G17980 Oryza glumaepatula OGLUM05G17980 I 0.929
ONIVA05G17670 Oryza nivara ONIVA05G17670 I 0.929
ORGLA05G0146600 Oryza glaberrima ORGLA05G0146600 I 0.929
Sb03g041920 Sorghum bicolor Sb03g041920 I 0.929
Si002413m.g Setaria italica Si002413m.g I 0.929
BRADI2G03467 Brachypodium distachyon BRADI2G03467 I 0.927
MTR_8g094580 Medicago truncatula MTR_8g094580 I 0.927
OB05G24820 Oryza brachyantha OB05G24820 I 0.927
Si004195m.g Setaria italica Si004195m.g I 0.927
VIT_06s0004g00020 Vitis vinifera VIT_06s0004g00020 I 0.927
Pavir.Ib01528 Panicum virgatum Pavir.Ib01528 I 0.927
F775_28813 Aegilops tauschii F775_28813 I 0.926
Si036303m.g Setaria italica Si036303m.g I 0.926
TRAES3BF002300010CFD_g Triticum aestivum TRAES3BF002300010CFD_g I 0.926
TRIUR3_14109 Triticum urartu TRIUR3_14109 I 0.926
GLYMA05G32850 Glycine max GLYMA05G32850 I 0.924
Pavir.Ea00010 Panicum virgatum Pavir.Ea00010 I 0.923
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I 0.923
POPTR_0007s04780 Populus trichocarpa POPTR_0007s04780 I 0.922
POPTR_0005s07060 Populus trichocarpa POPTR_0005s07060 I 0.921
SapurV1A.0311s0230 Salix purpurea SapurV1A.0311s0230 I 0.921
LPERR11G01300 Leersia perrieri LPERR11G01300 I 0.919
LPERR12G01440 Leersia perrieri LPERR12G01440 I 0.919
OMERI05G14410 Oryza meridionalis OMERI05G14410 I 0.919
Sb03g000330 Sorghum bicolor Sb03g000330 I 0.919
mgf002183m Mimulus guttatus mgf002183m I 0.919
MLOC_59162 Hordeum vulgare MLOC_59162 I 0.918
GSMUA_Achr10G08120_001 Musa acuminata GSMUA_Achr10G08120_001 I 0.917
Gorai.010G236700 Gossypium raimondii Gorai.010G236700 I 0.915
SapurV1A.2021s0010 Salix purpurea SapurV1A.2021s0010 I 0.914
Eucgr.F01463 Eucalyptus grandis Eucgr.F01463 I 0.913
POPTR_0003s14950 Populus trichocarpa POPTR_0003s14950 I 0.912
mgf013201m Mimulus guttatus mgf013201m I 0.911
SapurV1A.0059s0580 Salix purpurea SapurV1A.0059s0580 I 0.911
VIT_19s0027g00840 Vitis vinifera VIT_19s0027g00840 I 0.907
SapurV1A.0039s0530 Salix purpurea SapurV1A.0039s0530 I 0.907
SapurV1A.0076s0070 Salix purpurea SapurV1A.0076s0070 I 0.907
F775_23543 Aegilops tauschii F775_23543 I 0.906
TRAES3BF100600040CFD_g Triticum aestivum TRAES3BF100600040CFD_g I 0.906
Pavir.Ea03621 Panicum virgatum Pavir.Ea03621 I 0.906
GSMUA_Achr6G31580_001 Musa acuminata GSMUA_Achr6G31580_001 I 0.905
GSMUA_Achr4G32010_001 Musa acuminata GSMUA_Achr4G32010_001 I 0.904
AMTR_s00017p00255350 Amborella trichopoda AMTR_s00017p00255350 I 0.903
LPERR05G13140 Leersia perrieri LPERR05G13140 I 0.902
Gorai.010G171100 Gossypium raimondii Gorai.010G171100 I 0.902
PRUPE_ppa019007mg Prunus persica PRUPE_ppa019007mg I 0.901
Bo3g065200 Brassica oleracea Bo3g065200 I 0.900
VIT_19s0027g00910 Vitis vinifera VIT_19s0027g00910 I 0.900
Si022714m.g Setaria italica Si022714m.g I 0.899
Sb08g014060 Sorghum bicolor Sb08g014060 I 0.895
Pavir.J04049 Panicum virgatum Pavir.J04049 I 0.895
Bra034719 Brassica rapa Bra034719 I 0.893
LPERR01G08530 Leersia perrieri LPERR01G08530 N 0.893
PGSC0003DMG400039898 Solanum tuberosum PGSC0003DMG400039898 I 0.892
Cla023594 Citrullus lanatus Cla023594 I 0.892
Cagra.5641s0055 Capsella grandiflora Cagra.5641s0055 I 0.892
Carubv10014270m.g Capsella rubella Carubv10014270m.g I 0.892
SapurV1A.0344s0360 Salix purpurea SapurV1A.0344s0360 I 0.892
AT3G12910 Arabidopsis thaliana AT3G12910 D 0.891
fgenesh2_kg.3__1353__AT3G12910.1 Arabidopsis lyrata fgenesh2_kg.3__1353__AT3G12910.1 I 0.891
Thhalv10021225m.g Eutrema salsugineum Thhalv10021225m.g I 0.891
Bo1g138800 Brassica oleracea Bo1g138800 I 0.890
Bra039353 Brassica rapa Bra039353 I 0.890
GSMUA_Achr9G10040_001 Musa acuminata GSMUA_Achr9G10040_001 I 0.890
Lus10015389.g Linum usitatissimum Lus10015389.g I 0.889
GSMUA_Achr7G23250_001 Musa acuminata GSMUA_Achr7G23250_001 I 0.888
Bostr.3640s0064 Boechera stricta Bostr.3640s0064 I 0.888
GRMZM2G083347 Zea mays GRMZM2G083347 I 0.886
TCM_029321 Theobroma cacao TCM_029321 I 0.886
Sb08g022560 Sorghum bicolor Sb08g022560 I 0.883
POPTR_0011s05760 Populus trichocarpa POPTR_0011s05760 N 0.880
SapurV1A.0869s0210 Salix purpurea SapurV1A.0869s0210 I 0.880
fgenesh1_pg.scaffold_182000024 Physcomitrella patens fgenesh1_pg.scaffold_182000024 I 0.879
e_gw1.259.32.1 Physcomitrella patens e_gw1.259.32.1 I 0.878
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.877
BGIOSGA037382 Oryza indica BGIOSGA037382 I 0.875
OMERI12G08420 Oryza meridionalis OMERI12G08420 I 0.875
ONIVA12G11920 Oryza nivara ONIVA12G11920 I 0.875
ORUFI05G18190 Oryza rufipogon ORUFI05G18190 I 0.875
ORUFI10G07040 Oryza rufipogon ORUFI10G07040 I 0.875
OS12G0477400 Oryza sativa OS12G0477400 I 0.875
OGLUM12G13410 Oryza glumaepatula OGLUM12G13410 I 0.874
BRADI4G07527 Brachypodium distachyon BRADI4G07527 I 0.871
OPUNC12G10470 Oryza punctata OPUNC12G10470 I 0.871