CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava4505.m1
(
Manihot esculenta
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
cassava4505.m1
T296921_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.946
0.619
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.946
0.619
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY
RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.946
0.619
NAC48
M11084_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.930
0.584
AT3G12910
M07204_2.00
Arabidopsis thaliana
YGSCGKNDNDDHNMCGB
VCGKNDHHNHNMCGSCR
Dap-seq
OMalley et al.(2016)
AT3G12910_col_a
0.891
0.513
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava4505.m1
NAC/NAM
12
140
PPGFRFHPTDEELINHYLKKKASSSSDDPELSIIANINIYKFNPWELPGKALFGENEWFFFSSRDRKYPNGGRPNRTAASGYWKATGTDKPILSSNGSQCLGVKKSLVFYKGRAPKGIKTNWMMLEYRL
Links
Other
NAC/NAM
family TFs
Other
Manihot esculenta
TFs
148 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_029796
Theobroma cacao
TCM_029796
I
0.984
POPTR_0004s04920
Populus trichocarpa
POPTR_0004s04920
I
0.975
Gorai.006G088400
Gossypium raimondii
Gorai.006G088400
I
0.974
e_gw1.164.18.1
Physcomitrella patens
e_gw1.164.18.1
I
0.951
SapurV1A.0365s0200
Salix purpurea
SapurV1A.0365s0200
I
0.950
e_gw1.140.53.1
Physcomitrella patens
e_gw1.140.53.1
I
0.949
SapurV1A.0740s0040
Salix purpurea
SapurV1A.0740s0040
I
0.949
e_gw1.164.26.1
Physcomitrella patens
e_gw1.164.26.1
I
0.948
SapurV1A.3767s0010
Salix purpurea
SapurV1A.3767s0010
I
0.948
e_gw1.117.35.1
Physcomitrella patens
e_gw1.117.35.1
I
0.947
NAC002
Arabidopsis thaliana
AT1G01720
D
0.946
Bo5g001100
Brassica oleracea
Bo5g001100
I
0.946
Bra033239
Brassica rapa
Bra033239
I
0.946
GLYMA14G24220
Glycine max
GLYMA14G24220
I
0.946
cassava28909.valid.m1
Manihot esculenta
cassava28909.valid.m1
I
0.946
e_gw1.5.134.1
Physcomitrella patens
e_gw1.5.134.1
I
0.946
Bostr.5325s0094
Boechera stricta
Bostr.5325s0094
I
0.946
Cagra.1968s0112
Capsella grandiflora
Cagra.1968s0112
I
0.946
Carubv10009926m.g
Capsella rubella
Carubv10009926m.g
I
0.946
e_gw1.259.4.1
Physcomitrella patens
e_gw1.259.4.1
I
0.945
anac032
Vitis vinifera
VIT_18s0001g02300
I
0.943
GSMUA_Achr4G02390_001
Musa acuminata
GSMUA_Achr4G02390_001
I
0.942
ATAF1
Arabidopsis lyrata
scaffold_100066.1
I
0.942
mgf004020m
Mimulus guttatus
mgf004020m
I
0.942
cassava39074.m1
Manihot esculenta
cassava39074.m1
I
0.941
Aquca_014_00255
Aquilegia coerulea
Aquca_014_00255
I
0.941
BGIOSGA018048
Oryza indica
BGIOSGA018048
I
0.940
OBART05G16540
Oryza barthii
OBART05G16540
I
0.940
OGLUM05G17550
Oryza glumaepatula
OGLUM05G17550
I
0.940
ONIVA05G17220
Oryza nivara
ONIVA05G17220
I
0.940
OPUNC05G14600
Oryza punctata
OPUNC05G14600
I
0.940
ORGLA05G0143100
Oryza glaberrima
ORGLA05G0143100
I
0.940
ORUFI05G17750
Oryza rufipogon
ORUFI05G17750
I
0.940
OS05G0415400
Oryza sativa
OS05G0415400
I
0.940
TCM_035160
Theobroma cacao
TCM_035160
I
0.940
Gorai.010G051900
Gossypium raimondii
Gorai.010G051900
I
0.940
PK26157.1
Cannabis sativa
PK26157.1
I
0.939
GSMUA_Achr6G18720_001
Musa acuminata
GSMUA_Achr6G18720_001
I
0.937
LPERR05G13490
Leersia perrieri
LPERR05G13490
I
0.937
Gorai.005G088800
Gossypium raimondii
Gorai.005G088800
I
0.937
GRMZM2G162739
Zea mays
GRMZM2G162739
I
0.935
GRMZM2G079632
Zea mays
GRMZM2G079632
I
0.934
Sb02g006680
Sorghum bicolor
Sb02g006680
I
0.934
Solyc11g017470.1
Solanum lycopersicum
Solyc11g017470.1
I
0.934
GSMUA_Achr7G21780_001
Musa acuminata
GSMUA_Achr7G21780_001
I
0.933
Pavir.Ba03301
Panicum virgatum
Pavir.Ba03301
I
0.933
Si030752m.g
Setaria italica
Si030752m.g
I
0.932
Solyc04g009440.2
Solanum lycopersicum
Solyc04g009440.2
I
0.932
LPERR07G06440
Leersia perrieri
LPERR07G06440
I
0.931
Pavir.Bb00806
Panicum virgatum
Pavir.Bb00806
I
0.931
BGIOSGA000374
Oryza indica
BGIOSGA000374
I
0.930
BRADI2G57100
Brachypodium distachyon
BRADI2G57100
I
0.930
LPERR01G34090
Leersia perrieri
LPERR01G34090
I
0.930
OB01G48340
Oryza brachyantha
OB01G48340
I
0.930
OBART01G39590
Oryza barthii
OBART01G39590
I
0.930
OGLUM01G43820
Oryza glumaepatula
OGLUM01G43820
I
0.930
OMERI01G36460
Oryza meridionalis
OMERI01G36460
I
0.930
ONIVA01G44460
Oryza nivara
ONIVA01G44460
I
0.930
OPUNC01G38300
Oryza punctata
OPUNC01G38300
I
0.930
ORGLA01G0334900
Oryza glaberrima
ORGLA01G0334900
I
0.930
ORUFI01G42940
Oryza rufipogon
ORUFI01G42940
I
0.930
NAC48
Oryza sativa
OS01G0884300
D
0.930
BGIOSGA019897
Oryza indica
BGIOSGA019897
I
0.929
GRMZM2G014653
Zea mays
GRMZM2G014653
I
0.929
OGLUM05G17980
Oryza glumaepatula
OGLUM05G17980
I
0.929
ONIVA05G17670
Oryza nivara
ONIVA05G17670
I
0.929
ORGLA05G0146600
Oryza glaberrima
ORGLA05G0146600
I
0.929
Sb03g041920
Sorghum bicolor
Sb03g041920
I
0.929
Si002413m.g
Setaria italica
Si002413m.g
I
0.929
BRADI2G03467
Brachypodium distachyon
BRADI2G03467
I
0.927
MTR_8g094580
Medicago truncatula
MTR_8g094580
I
0.927
OB05G24820
Oryza brachyantha
OB05G24820
I
0.927
Si004195m.g
Setaria italica
Si004195m.g
I
0.927
VIT_06s0004g00020
Vitis vinifera
VIT_06s0004g00020
I
0.927
Pavir.Ib01528
Panicum virgatum
Pavir.Ib01528
I
0.927
F775_28813
Aegilops tauschii
F775_28813
I
0.926
Si036303m.g
Setaria italica
Si036303m.g
I
0.926
TRAES3BF002300010CFD_g
Triticum aestivum
TRAES3BF002300010CFD_g
I
0.926
TRIUR3_14109
Triticum urartu
TRIUR3_14109
I
0.926
GLYMA05G32850
Glycine max
GLYMA05G32850
I
0.924
Pavir.Ea00010
Panicum virgatum
Pavir.Ea00010
I
0.923
Pavir.Ia03443
Panicum virgatum
Pavir.Ia03443
I
0.923
POPTR_0007s04780
Populus trichocarpa
POPTR_0007s04780
I
0.922
POPTR_0005s07060
Populus trichocarpa
POPTR_0005s07060
I
0.921
SapurV1A.0311s0230
Salix purpurea
SapurV1A.0311s0230
I
0.921
LPERR11G01300
Leersia perrieri
LPERR11G01300
I
0.919
LPERR12G01440
Leersia perrieri
LPERR12G01440
I
0.919
OMERI05G14410
Oryza meridionalis
OMERI05G14410
I
0.919
Sb03g000330
Sorghum bicolor
Sb03g000330
I
0.919
mgf002183m
Mimulus guttatus
mgf002183m
I
0.919
MLOC_59162
Hordeum vulgare
MLOC_59162
I
0.918
GSMUA_Achr10G08120_001
Musa acuminata
GSMUA_Achr10G08120_001
I
0.917
Gorai.010G236700
Gossypium raimondii
Gorai.010G236700
I
0.915
SapurV1A.2021s0010
Salix purpurea
SapurV1A.2021s0010
I
0.914
Eucgr.F01463
Eucalyptus grandis
Eucgr.F01463
I
0.913
POPTR_0003s14950
Populus trichocarpa
POPTR_0003s14950
I
0.912
mgf013201m
Mimulus guttatus
mgf013201m
I
0.911
SapurV1A.0059s0580
Salix purpurea
SapurV1A.0059s0580
I
0.911
VIT_19s0027g00840
Vitis vinifera
VIT_19s0027g00840
I
0.907
SapurV1A.0039s0530
Salix purpurea
SapurV1A.0039s0530
I
0.907
SapurV1A.0076s0070
Salix purpurea
SapurV1A.0076s0070
I
0.907
F775_23543
Aegilops tauschii
F775_23543
I
0.906
TRAES3BF100600040CFD_g
Triticum aestivum
TRAES3BF100600040CFD_g
I
0.906
Pavir.Ea03621
Panicum virgatum
Pavir.Ea03621
I
0.906
GSMUA_Achr6G31580_001
Musa acuminata
GSMUA_Achr6G31580_001
I
0.905
GSMUA_Achr4G32010_001
Musa acuminata
GSMUA_Achr4G32010_001
I
0.904
AMTR_s00017p00255350
Amborella trichopoda
AMTR_s00017p00255350
I
0.903
LPERR05G13140
Leersia perrieri
LPERR05G13140
I
0.902
Gorai.010G171100
Gossypium raimondii
Gorai.010G171100
I
0.902
PRUPE_ppa019007mg
Prunus persica
PRUPE_ppa019007mg
I
0.901
Bo3g065200
Brassica oleracea
Bo3g065200
I
0.900
VIT_19s0027g00910
Vitis vinifera
VIT_19s0027g00910
I
0.900
Si022714m.g
Setaria italica
Si022714m.g
I
0.899
Sb08g014060
Sorghum bicolor
Sb08g014060
I
0.895
Pavir.J04049
Panicum virgatum
Pavir.J04049
I
0.895
Bra034719
Brassica rapa
Bra034719
I
0.893
LPERR01G08530
Leersia perrieri
LPERR01G08530
N
0.893
PGSC0003DMG400039898
Solanum tuberosum
PGSC0003DMG400039898
I
0.892
Cla023594
Citrullus lanatus
Cla023594
I
0.892
Cagra.5641s0055
Capsella grandiflora
Cagra.5641s0055
I
0.892
Carubv10014270m.g
Capsella rubella
Carubv10014270m.g
I
0.892
SapurV1A.0344s0360
Salix purpurea
SapurV1A.0344s0360
I
0.892
AT3G12910
Arabidopsis thaliana
AT3G12910
D
0.891
fgenesh2_kg.3__1353__AT3G12910.1
Arabidopsis lyrata
fgenesh2_kg.3__1353__AT3G12910.1
I
0.891
Thhalv10021225m.g
Eutrema salsugineum
Thhalv10021225m.g
I
0.891
Bo1g138800
Brassica oleracea
Bo1g138800
I
0.890
Bra039353
Brassica rapa
Bra039353
I
0.890
GSMUA_Achr9G10040_001
Musa acuminata
GSMUA_Achr9G10040_001
I
0.890
Lus10015389.g
Linum usitatissimum
Lus10015389.g
I
0.889
GSMUA_Achr7G23250_001
Musa acuminata
GSMUA_Achr7G23250_001
I
0.888
Bostr.3640s0064
Boechera stricta
Bostr.3640s0064
I
0.888
GRMZM2G083347
Zea mays
GRMZM2G083347
I
0.886
TCM_029321
Theobroma cacao
TCM_029321
I
0.886
Sb08g022560
Sorghum bicolor
Sb08g022560
I
0.883
POPTR_0011s05760
Populus trichocarpa
POPTR_0011s05760
N
0.880
SapurV1A.0869s0210
Salix purpurea
SapurV1A.0869s0210
I
0.880
fgenesh1_pg.scaffold_182000024
Physcomitrella patens
fgenesh1_pg.scaffold_182000024
I
0.879
e_gw1.259.32.1
Physcomitrella patens
e_gw1.259.32.1
I
0.878
SapurV1A.0093s0260
Salix purpurea
SapurV1A.0093s0260
I
0.877
BGIOSGA037382
Oryza indica
BGIOSGA037382
I
0.875
OMERI12G08420
Oryza meridionalis
OMERI12G08420
I
0.875
ONIVA12G11920
Oryza nivara
ONIVA12G11920
I
0.875
ORUFI05G18190
Oryza rufipogon
ORUFI05G18190
I
0.875
ORUFI10G07040
Oryza rufipogon
ORUFI10G07040
I
0.875
OS12G0477400
Oryza sativa
OS12G0477400
I
0.875
OGLUM12G13410
Oryza glumaepatula
OGLUM12G13410
I
0.874
BRADI4G07527
Brachypodium distachyon
BRADI4G07527
I
0.871
OPUNC12G10470
Oryza punctata
OPUNC12G10470
I
0.871