CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_020_00035
(
Aquilegia coerulea
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Aquca_020_00035
T297194_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NTL9
M02371_2.00
Arabidopsis thaliana
ATTACTTAA
TTAAGTAAT
PBM
Weirauch et al.(2014)
pTH8207
0.888
0.763
NTL9
M11081_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBNAC_01
0.888
0.763
NTL9
M11082_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBNAC_02
0.888
0.763
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_020_00035.1
NAC/NAM
10
139
PVGYRFSPTDEELVNYYLKLKIQGQNSKVEAIPEVDVCKWEPWDLPSLSVIKNEDPEWFFFCPRDQKYPKGRRSNRATDKGYWKATGKDRTIKARTSGMKKIGMKKTLVFHRGRAPEGQRTGWIMHEYRM
Links
Other
NAC/NAM
family TFs
Other
Aquilegia coerulea
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_020_00034
Aquilegia coerulea
Aquca_020_00034
I
0.967
Lus10010148.g
Linum usitatissimum
Lus10010148.g
I
0.948
Eucgr.E01095
Eucalyptus grandis
Eucgr.E01095
I
0.934
Lus10008285.g
Linum usitatissimum
Lus10008285.g
I
0.931
Lus10033251.g
Linum usitatissimum
Lus10033251.g
I
0.931
POPTR_0011s15230
Populus trichocarpa
POPTR_0011s15230
I
0.930
PRUPE_ppa001291mg
Prunus persica
PRUPE_ppa001291mg
I
0.928
Pm029581
Prunus mume
Pm029581
I
0.928
POPTR_0001s45700
Populus trichocarpa
POPTR_0001s45700
I
0.927
MDP0000266908
Malus domestica
MDP0000266908
I
0.927
PK02019.1
Cannabis sativa
PK02019.1
I
0.921
TCM_015584
Theobroma cacao
TCM_015584
I
0.919
mgf022344m
Mimulus guttatus
mgf022344m
I
0.918
Gorai.008G261400
Gossypium raimondii
Gorai.008G261400
I
0.914
evm.TU.supercontig_37.112
Carica papaya
evm.TU.supercontig_37.112
I
0.911
VIT_02s0025g03020
Vitis vinifera
VIT_02s0025g03020
I
0.910
MDP0000658409
Malus domestica
MDP0000658409
I
0.909
30068.m002619
Ricinus communis
30068.m002619
I
0.907
Ciclev10019282m.g
Citrus clementina
Ciclev10019282m.g
I
0.900
gene01851-v1.0-hybrid
Fragaria vesca
gene01851-v1.0-hybrid
I
0.900
orange1.1g009388m.g
Citrus sinensis
orange1.1g009388m.g
I
0.900
SapurV1A.0285s0090
Salix purpurea
SapurV1A.0285s0090
I
0.899
NAC014
Arabidopsis thaliana
AT1G33060
I
0.898
Bo5g086780
Brassica oleracea
Bo5g086780
I
0.898
Bra010193
Brassica rapa
Bra010193
I
0.898
Thhalv10007021m.g
Eutrema salsugineum
Thhalv10007021m.g
I
0.898
ANAC014
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1002639
I
0.894
Bostr.3359s0059
Boechera stricta
Bostr.3359s0059
I
0.893
Cagra.1443s0001
Capsella grandiflora
Cagra.1443s0001
I
0.893
Carubv10008529m.g
Capsella rubella
Carubv10008529m.g
I
0.893
NTL9
Arabidopsis thaliana
AT4G35580
D
0.888
NTL9
Arabidopsis lyrata
fgenesh2_kg.7__521__AT4G35580.1
I
0.888
Bostr.7867s1416
Boechera stricta
Bostr.7867s1416
I
0.888
Cagra.2350s0100
Capsella grandiflora
Cagra.2350s0100
I
0.888
Carubv10007613m.g
Capsella rubella
Carubv10007613m.g
I
0.888