CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.22252s0011
(
Boechera stricta
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Bostr.22252s0011
T297275_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC050
M07200_2.00
Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG
Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a
0.970
0.991
ANAC050
M07201_2.00
Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG
Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a
0.970
0.991
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.22252s0011.1.p
NAC/NAM
28
154
APGFRFHPTDEELVSYYLKRKVLGKPVRFDAIGEVDIYKHEPWDLAVFSRLKTRDQEWYFYSALDKKYGNGARMNRATNKGYWKATGKDREIRRDIQLLGMKKTLVFHSGRAPDGLRTNWVMHEYRL
Bostr.22252s0011.2.p
NAC/NAM
28
154
APGFRFHPTDEELVSYYLKRKVLGKPVRFDAIGEVDIYKHEPWDLAVFSRLKTRDQEWYFYSALDKKYGNGARMNRATNKGYWKATGKDREIRRDIQLLGMKKTLVFHSGRAPDGLRTNWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Boechera stricta
TFs
98 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy