Cagra.1443s0015 (Capsella grandiflora)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cagra.1443s0015 T297394_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC13
M07170_2.00 		Arabidopsis thaliana
TDNCTTGYYNNNCAAG
CTTGNNNRRCAAGNHA		 Dap-seq
OMalley et al.(2016)
ANAC013_col_a 		0.968 0.982
ANAC13
M07171_2.00 		Arabidopsis thaliana
CTTGYBHNNCAAGNHAH
DTDNCTTGNNDVRCAAG		 Dap-seq
OMalley et al.(2016)
ANAC013_colamp_a 		0.968 0.982
ANAC13
M11077_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANAC013_Q2 		0.968 0.982
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1443s0015.1.p NAC/NAM 12 136

Links

Other NAC/NAM family TFs
Other Capsella grandiflora TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANAC13 Arabidopsis thaliana AT1G32870 D 0.968
Carubv10008817m.g Capsella rubella Carubv10008817m.g I 0.968
ANAC13 Arabidopsis lyrata fgenesh2_kg.1__3425__AT1G32870.2 I 0.964
Bostr.3359s0074 Boechera stricta Bostr.3359s0074 I 0.964
Thhalv10007369m.g Eutrema salsugineum Thhalv10007369m.g I 0.948
Bo7g057730 Brassica oleracea Bo7g057730 I 0.933
Bra012342 Brassica rapa Bra012342 I 0.910
SapurV1A.0134s0420 Salix purpurea SapurV1A.0134s0420 I 0.900
POPTR_0002s06210 Populus trichocarpa POPTR_0002s06210 I 0.898
Solyc04g072220.2 Solanum lycopersicum Solyc04g072220.2 I 0.898
MDP0000146969 Malus domestica MDP0000146969 I 0.895
MDP0000169485 Malus domestica MDP0000169485 I 0.895
PGSC0003DMG400031149 Solanum tuberosum PGSC0003DMG400031149 I 0.890
POPTR_0005s22180 Populus trichocarpa POPTR_0005s22180 I 0.890
mg018130m Mimulus guttatus mg018130m I 0.882
evm.TU.supercontig_26.135 Carica papaya evm.TU.supercontig_26.135 I 0.880
Gorai.009G260000 Gossypium raimondii Gorai.009G260000 I 0.879
Solyc12g056790.1 Solanum lycopersicum Solyc12g056790.1 I 0.878
Cla013854 Citrullus lanatus Cla013854 I 0.877
MDP0000852271 Malus domestica MDP0000852271 I 0.874
TCM_036587 Theobroma cacao TCM_036587 I 0.871
SapurV1A.0348s0040 Salix purpurea SapurV1A.0348s0040 I 0.871