CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.G01550
(
Eucalyptus grandis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Eucgr.G01550
T297748_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.G01550.1
NAC/NAM
11
139
PVGYGFRPTDEELVDHYLKLKVQGFTGVNCIIPEVDICKWEPWELPKIFEEQSIIPPDDKVQEWWFFYLQTPRIQRSTPLGFWKKTGVDRPIKAGDRNREIGTKKTLVFHRGHGKRAIGTKWVIHEYHL
Links
Other
NAC/NAM
family TFs
Other
Eucalyptus grandis
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.G01067
Eucalyptus grandis
Eucgr.G01067
N
0.994
Eucgr.G01548
Eucalyptus grandis
Eucgr.G01548
N
0.993
Eucgr.G01066
Eucalyptus grandis
Eucgr.G01066
N
0.971
mgf022344m
Mimulus guttatus
mgf022344m
I
0.919
PGSC0003DMG400000555
Solanum tuberosum
PGSC0003DMG400000555
I
0.911
Solyc03g080090.2
Solanum lycopersicum
Solyc03g080090.2
I
0.911
evm.TU.supercontig_3.170
Carica papaya
evm.TU.supercontig_3.170
N
0.893
POPTR_0002s15560
Populus trichocarpa
POPTR_0002s15560
I
0.891
gw1.6.394.1
Physcomitrella patens
gw1.6.394.1
I
0.890
fgenesh1_pg.scaffold_182000024
Physcomitrella patens
fgenesh1_pg.scaffold_182000024
I
0.889
Pm019659
Prunus mume
Pm019659
I
0.882
Ca_27204
Cicer arietinum
Ca_27204
I
0.881
SapurV1A.0162s0450
Salix purpurea
SapurV1A.0162s0450
I
0.881
AMTR_s00018p00071850
Amborella trichopoda
AMTR_s00018p00071850
I
0.880
Lus10032919.g
Linum usitatissimum
Lus10032919.g
I
0.880
SapurV1A.0093s0260
Salix purpurea
SapurV1A.0093s0260
I
0.880
SapurV1A.0321s0350
Salix purpurea
SapurV1A.0321s0350
I
0.880
gw1.1.690.1
Physcomitrella patens
gw1.1.690.1
I
0.878
POPTR_0014s10350
Populus trichocarpa
POPTR_0014s10350
I
0.877
POPTR_0014s10360
Populus trichocarpa
POPTR_0014s10360
I
0.877
SapurV1A.0321s0340
Salix purpurea
SapurV1A.0321s0340
I
0.876
SapurV1A.0321s0360
Salix purpurea
SapurV1A.0321s0360
I
0.876
POPTR_0014s10330
Populus trichocarpa
POPTR_0014s10330
I
0.874
Eucgr.L03347
Eucalyptus grandis
Eucgr.L03347
N
0.874
Lus10015587.g
Linum usitatissimum
Lus10015587.g
I
0.874
SapurV1A.0024s0340
Salix purpurea
SapurV1A.0024s0340
I
0.873
GLYMA14G36840
Glycine max
GLYMA14G36840
I
0.872
MTR_5g069030
Medicago truncatula
MTR_5g069030
I
0.872