CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene09702-v1.0-hybrid
(
Fragaria vesca
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
gene09702-v1.0-hybrid
T297931_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna09702.1-v1.0-hybrid
NAC/NAM
17
143
PAGFRFHPSDEELIVHYLKNKVTSSPLPATIITELDLYKYNPWELPPKALFGKEEWYFFTPRDRKYPNGTRPNRAAGLGYWKATGTDKHIFSSCGTKSIGVKKALVFYTGHPPKGVKTEWIMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Fragaria vesca
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000802924
Malus domestica
MDP0000802924
N
0.961
PRUPE_ppa015363mg
Prunus persica
PRUPE_ppa015363mg
N
0.956
Pm030099
Prunus mume
Pm030099
N
0.956
Lus10036117.g
Linum usitatissimum
Lus10036117.g
I
0.921
Lus10007410.g
Linum usitatissimum
Lus10007410.g
I
0.918
TCM_041055
Theobroma cacao
TCM_041055
I
0.916
GLYMA03G33690
Glycine max
GLYMA03G33690
I
0.915
MTR_7g100990
Medicago truncatula
MTR_7g100990
I
0.915
Ca_12031
Cicer arietinum
Ca_12031
I
0.911
cassava3577.m1
Manihot esculenta
cassava3577.m1
I
0.911
gene24179-v1.0-hybrid
Fragaria vesca
gene24179-v1.0-hybrid
I
0.910
GLYMA19G36421
Glycine max
GLYMA19G36421
I
0.909
PRUPE_ppa009438mg
Prunus persica
PRUPE_ppa009438mg
I
0.906
chr3.CM0111.130.nd
Lotus japonicus
chr3.CM0111.130.nd
I
0.906
GLYMA05G15533
Glycine max
GLYMA05G15533
I
0.903
GLYMA12G21272
Glycine max
GLYMA12G21272
I
0.903
GLYMA13G40251
Glycine max
GLYMA13G40251
I
0.903
VIT_06s0004g03080
Vitis vinifera
VIT_06s0004g03080
I
0.903
Pm012630
Prunus mume
Pm012630
I
0.903
chr1.CM0033.600.nc
Lotus japonicus
chr1.CM0033.600.nc
I
0.903
VIT_08s0040g02110
Vitis vinifera
VIT_08s0040g02110
I
0.899
GLYMA12G29360
Glycine max
GLYMA12G29360
I
0.896
MTR_2g093810
Medicago truncatula
MTR_2g093810
I
0.887
PRUPE_ppa017586mg
Prunus persica
PRUPE_ppa017586mg
N
0.887
MDP0000255884
Malus domestica
MDP0000255884
N
0.880
orange1.1g042614m.g
Citrus sinensis
orange1.1g042614m.g
N
0.875
gene04766-v1.0-hybrid
Fragaria vesca
gene04766-v1.0-hybrid
I
0.873
OPUNC01G34000
Oryza punctata
OPUNC01G34000
I
0.872