CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene20078-v1.0-hybrid
(
Fragaria vesca
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
gene20078-v1.0-hybrid
T297964_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna20078.1-v1.0-hybrid
NAC/NAM
24
153
LPGYRFHPTDEELVRFYLRRKVENKPIRLELIKLLDIYKYDPWDLPKASGLVGEKEWYFFCRRGKKYRNSIRPNRVTKSGFWKATGIDKPVYSVGGEFQTCIGLKKSLVYYRGSAGKGTKTDWMMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Fragaria vesca
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa025263mg
Prunus persica
PRUPE_ppa025263mg
N
0.951
Pm010673
Prunus mume
Pm010673
N
0.951
Gorai.004G270300
Gossypium raimondii
Gorai.004G270300
I
0.890
Gorai.004G270400
Gossypium raimondii
Gorai.004G270400
I
0.878
TCM_032389
Theobroma cacao
TCM_032389
N
0.877
Gorai.002G036700
Gossypium raimondii
Gorai.002G036700
I
0.877
GLYMA14G03441
Glycine max
GLYMA14G03441
I
0.876
chr2.LjT04L10.100.nc
Lotus japonicus
chr2.LjT04L10.100.nc
I
0.872
Pm014764
Prunus mume
Pm014764
I
0.871