Gorai.004G270300 (Gossypium raimondii)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Gorai.004G270300 T298075_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
JUB1
M07191_2.00 		Arabidopsis thaliana
YKCCGTNNNNNHNMCGBHRY
RYDVCGKNDNNNNNACGGMR		 Dap-seq
OMalley et al.(2016)
ANAC042_col_a 		0.893 0.781
ANAC094
M07236_2.00 		Arabidopsis thaliana
YDCCGTNNNNNHNACGBH
DVCGTNDNNNNNACGGHR		 Dap-seq
OMalley et al.(2016)
ANAC094_col_a 		0.890 0.693
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G270300.1 NAC/NAM 17 143

Links

Other NAC/NAM family TFs
Other Gossypium raimondii TFs

290 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28353.m000054 Ricinus communis 28353.m000054 I
ERF038 Arabidopsis thaliana AT2G35700 D
ERF039 Arabidopsis thaliana AT4G16750 D
Bo1g053270 Brassica oleracea Bo1g053270 I
Bo3g028500 Brassica oleracea Bo3g028500 I
Bo4g036220 Brassica oleracea Bo4g036220 I
Bo7g104770 Brassica oleracea Bo7g104770 I
Bostr.23794s0528 Boechera stricta Bostr.23794s0528 I
Bostr.30275s0134 Boechera stricta Bostr.30275s0134 I
Bra005314 Brassica rapa Bra005314 I
Bra012693 Brassica rapa Bra012693 I
Bra023026 Brassica rapa Bra023026 I
Bra040092 Brassica rapa Bra040092 I
Cagra.0993s0081 Capsella grandiflora Cagra.0993s0081 I
Carubv10005867m.g Capsella rubella Carubv10005867m.g I
Carubv10024111m.g Capsella rubella Carubv10024111m.g I
cassava4979.m1 Manihot esculenta cassava4979.m1 I
Ca_12765 Cicer arietinum Ca_12765 I
Ciclev10024602m.g Citrus clementina Ciclev10024602m.g I
Cla005715 Citrullus lanatus Cla005715 I
Cucsa.321050 Cucumis sativus Cucsa.321050 I
Eucgr.D02102 Eucalyptus grandis Eucgr.D02102 I
evm.TU.supercontig_89.73 Carica papaya evm.TU.supercontig_89.73 I
ATERF38 Arabidopsis lyrata fgenesh2_kg.4__1597__AT2G35700.1 I
fgenesh2_kg.7__2633__AT4G16750.1 Arabidopsis lyrata fgenesh2_kg.7__2633__AT4G16750.1 I
GLYMA05G04920 Glycine max GLYMA05G04920 I
GLYMA11G03790 Glycine max GLYMA11G03790 I
GLYMA17G15310 Glycine max GLYMA17G15310 I
Gorai.003G175100 Gossypium raimondii Gorai.003G175100 I
Gorai.004G196700 Gossypium raimondii Gorai.004G196700 I
Gorai.007G028800 Gossypium raimondii Gorai.007G028800 I
LjT33K05.50.nd Lotus japonicus LjT33K05.50.nd I
LjT37H17.40.nd Lotus japonicus LjT37H17.40.nd I
MTR_4g100650 Medicago truncatula MTR_4g100650 I
orange1.1g023148m.g Citrus sinensis orange1.1g023148m.g I
PK25970.1 Cannabis sativa PK25970.1 I
Pm023417 Prunus mume Pm023417 I
POPTR_0001s15550 Populus trichocarpa POPTR_0001s15550 I
POPTR_0003s07700 Populus trichocarpa POPTR_0003s07700 I
PRUPE_ppa010340mg Prunus persica PRUPE_ppa010340mg I
Q3HS42_BRANA Brassica napus Q3HS42_BRANA D
Q3HS43_BRANA Brassica napus Q3HS43_BRANA D
Q3HS44_BRANA Brassica napus Q3HS44_BRANA D
Q5MAR7_BRANA Brassica napus Q5MAR7_BRANA D
SapurV1A.1360s0120 Salix purpurea SapurV1A.1360s0120 I
SapurV1A.1528s0030 Salix purpurea SapurV1A.1528s0030 I
TCM_015930 Theobroma cacao TCM_015930 I
Thhalv10017258m.g Eutrema salsugineum Thhalv10017258m.g I
Thhalv10026276m.g Eutrema salsugineum Thhalv10026276m.g I