Lus10033239.g (Linum usitatissimum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Lus10033239.g T298333_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC012
M00971_2.00 		Arabidopsis thaliana
NYAMGYHANN
NNTDRCKTRN		 PBM
Lindemose et al.(2014)
SND1 		0.955 0.921
MDP0000762302
M02383_2.00 		Malus domestica
NNNAMKHNWN
NWNDMKTNNN		 PBM
Weirauch et al.(2014)
pTH9205 		0.953 0.912
NAC043
M02370_2.00 		Arabidopsis thaliana
NTTACGYWAN
NTWRCGTAAN		 PBM
Weirauch et al.(2014)
pTH8161 		0.925 0.886
NAC043
M07192_2.00 		Arabidopsis thaliana
TRCKTVHDNHNYAMG
CKTRNDNHDBAMGYA		 Dap-seq
OMalley et al.(2016)
NST1_colamp_a 		0.925 0.886
NAC043
M07193_2.00 		Arabidopsis thaliana
RCKTVHDNHNYAMGYWA
TWRCKTRNDNHDBAMGY		 Dap-seq
OMalley et al.(2016)
NST1_col_v31 		0.925 0.886
OS06G0131700
M02378_2.00 		Oryza sativa
NNNNHMDNND
HNNHKDNNNN		 PBM
Weirauch et al.(2014)
pTH8356 		0.918 0.877
SMB
M07184_2.00 		Arabidopsis thaliana
TWNCKTVHDNHNYAMGYWAYH
DRTWRCKTRNDNHDBAMGNWA		 Dap-seq
OMalley et al.(2016)
SMB_col_a 		0.917 0.816
SMB
M07185_2.00 		Arabidopsis thaliana
TWNCKTVNNNNNYAMG
CKTRNNNNNBAMGNWA		 Dap-seq
OMalley et al.(2016)
SMB_colamp_a 		0.917 0.816
BRN2
M07217_2.00 		Arabidopsis thaliana
CKTVHDNNNYAMGYWA
TWRCKTRNNNHDBAMG		 Dap-seq
OMalley et al.(2016)
ANAC070_colamp_a 		0.895 0.789
BRN2
M07218_2.00 		Arabidopsis thaliana
TWDCKTVHDNHDYAMGYWAHH
DDTWRCKTRHDNHDBAMGHWA		 Dap-seq
OMalley et al.(2016)
ANAC070_col 		0.895 0.789
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10033239 NAC/NAM 17 145

Links

Other NAC/NAM family TFs
Other Linum usitatissimum TFs

287 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000001160 Ailuropoda melanoleuca ENSAMEG00000001160 I
Alligator_sinensis_CCG020665.1 Alligator sinensis Alligator_sinensis_CCG020665.1 I
ENSBTAP00000000107-D1 Bos grunniens ENSBTAP00000000107-D1 I
SETDB1 Bos taurus ENSBTAG00000000098 I
SETDB1 Callithrix jacchus ENSCJAG00000006972 I
SETDB1 Canis familiaris ENSCAFG00000023501 I
SETDB1 Cavia porcellus ENSCPOG00000001632 I
Cmyd_10007606 Chelonia mydas Cmyd_10007606 I
ENSCSAG00000018034 Chlorocebus sabaeus ENSCSAG00000018034 I
SETDB1 Choloepus hoffmanni ENSCHOG00000004013 I
SETDB1 Dasypus novemcinctus ENSDNOG00000007754 I
Setdb1 Dipodomys ordii ENSDORG00000006830 I
SETDB1 Equus caballus ENSECAG00000023954 I
SETDB1 Erinaceus europaeus ENSEEUG00000015825 I
SETDB1 Felis catus ENSFCAG00000009655 I
SETDB1 Gorilla gorilla ENSGGOG00000016308 I
SETDB1 Homo sapiens ENSG00000143379 D
ENSSTOG00000006770 Ictidomys tridecemlineatus ENSSTOG00000006770 I
SETDB1 Loxodonta africana ENSLAFG00000004006 I
ENSP00000357965 Macaca fascicularis ENSP00000357965 I
SETDB1 Macaca mulatta ENSMMUG00000023235 I
ENSMEUG00000006544 Macropus eugenii ENSMEUG00000006544 I
ENSMPUG00000004298 Mustela putorius furo ENSMPUG00000004298 I
Setdb1 Mus musculus ENSMUSG00000015697 I
Myotis_brandtii_SETDB1_10031834 Myotis brandtii Myotis_brandtii_SETDB1_10031834 I
SETDB1 Myotis lucifugus ENSMLUG00000010486 I
SETDB1 Ochotona princeps ENSOPRG00000015349 I
SETDB1 Oryctolagus cuniculus ENSOCUG00000003642 I
SETDB1 Otolemur garnettii ENSOGAG00000010320 I
ENSOARG00000020880 Ovis aries ENSOARG00000020880 I
SETDB1 Pan troglodytes ENSPTRG00000001267 I
ENSPANG00000020214 Papio anubis ENSPANG00000020214 I
ENSPSIG00000008407 Pelodiscus sinensis ENSPSIG00000008407 I
ENSPPYG00000000887 Pongo abelii ENSPPYG00000000887 I
SETDB1 Procavia capensis ENSPCAG00000002527 I
SETDB1 Pteropus vampyrus ENSPVAG00000004355 I
Setdb1 Rattus norvegicus ENSRNOG00000021143 I
SETDB1 Sus scrofa ENSSSCG00000006645 I
SETDB1 Tupaia belangeri ENSTBEG00000009306 I
SETDB1 Tursiops truncatus ENSTTRG00000006966 I
SETDB1 Vicugna pacos ENSVPAG00000005440 I