CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10042466.g
(
Linum usitatissimum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Lus10042466.g
T298372_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10042466
NAC/NAM
14
145
APGFRFHPRDEELVCDYLFNKITFSRSLFFIEVDLNSCEPWDLPETTRVGGKEWYFYSRRDRKYATGLRTNRATASGYWKATGKDRAVIRNEVSINKQRQQQLVGMRKTLVFYQGRAPKGHKTDWVMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Linum usitatissimum
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10026200.g
Linum usitatissimum
Lus10026200.g
N
0.996
VIT_19s0027g00230
Vitis vinifera
VIT_19s0027g00230
N
0.978
OGLUM04G25460
Oryza glumaepatula
OGLUM04G25460
N
0.974
ONIVA04G24570
Oryza nivara
ONIVA04G24570
N
0.974
OPUNC04G23070
Oryza punctata
OPUNC04G23070
N
0.974
MTR_3g116070
Medicago truncatula
MTR_3g116070
N
0.960
Thhalv10015488m.g
Eutrema salsugineum
Thhalv10015488m.g
N
0.924
Eucgr.B03693
Eucalyptus grandis
Eucgr.B03693
N
0.915
cassava27937.m1
Manihot esculenta
cassava27937.m1
N
0.914
TCM_032479
Theobroma cacao
TCM_032479
N
0.895
orange1.1g047639m.g
Citrus sinensis
orange1.1g047639m.g
N
0.890
Gorai.005G020300
Gossypium raimondii
Gorai.005G020300
N
0.885
Gorai.005G020600
Gossypium raimondii
Gorai.005G020600
N
0.885
Gorai.009G354900
Gossypium raimondii
Gorai.009G354900
N
0.877
orange1.1g046003m.g
Citrus sinensis
orange1.1g046003m.g
N
0.874
BRADI4G26600
Brachypodium distachyon
BRADI4G26600
N
0.873
orange1.1g041697m.g
Citrus sinensis
orange1.1g041697m.g
N
0.871