CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MDP0000198108
(
Malus domestica
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
MDP0000198108
T298436_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000198108
NAC/NAM
23
151
LPSVRFKPTDELLVSYYLRSKIQGTDSLFRHTIPEIDVCKYEPCDLPAFFPEDHEKEWFFFSRPDYKYINSTRCNRATDQGFYKITGKEREIRAEESKAVIGKKRILTFYEGRVPKSKKTDWVVHEYYL
Links
Other
NAC/NAM
family TFs
Other
Malus domestica
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000249947
Malus domestica
MDP0000249947
N
0.984
Pm028720
Prunus mume
Pm028720
N
0.976
PRUPE_ppa019865mg
Prunus persica
PRUPE_ppa019865mg
N
0.974
Pm028718
Prunus mume
Pm028718
N
0.969
PRUPE_ppa026972mg
Prunus persica
PRUPE_ppa026972mg
N
0.967
MDP0000291838
Malus domestica
MDP0000291838
N
0.962
MDP0000392668
Malus domestica
MDP0000392668
N
0.962
MDP0000136652
Malus domestica
MDP0000136652
N
0.956
MDP0000182344
Malus domestica
MDP0000182344
N
0.956
gene23394-v1.0-hybrid
Fragaria vesca
gene23394-v1.0-hybrid
N
0.942
Pm028721
Prunus mume
Pm028721
N
0.935
MDP0000138340
Malus domestica
MDP0000138340
N
0.930
MDP0000688878
Malus domestica
MDP0000688878
N
0.930
Pm028723
Prunus mume
Pm028723
N
0.897
PRUPE_ppa023197mg
Prunus persica
PRUPE_ppa023197mg
N
0.896
MTR_8g023860
Medicago truncatula
MTR_8g023860
I
0.894
Bo00853s060
Brassica oleracea
Bo00853s060
I
0.893
Pm018442
Prunus mume
Pm018442
N
0.893
Bra008553
Brassica rapa
Bra008553
I
0.889
Pm028722
Prunus mume
Pm028722
I
0.888
PRUPE_ppb017658mg
Prunus persica
PRUPE_ppb017658mg
I
0.887
PGSC0003DMG400000555
Solanum tuberosum
PGSC0003DMG400000555
I
0.885
PRUPE_ppa019241mg
Prunus persica
PRUPE_ppa019241mg
N
0.884
MTR_8g023840
Medicago truncatula
MTR_8g023840
I
0.883
Ca_20988
Cicer arietinum
Ca_20988
I
0.882
VIT_15s0048g02300
Vitis vinifera
VIT_15s0048g02300
N
0.881
Pm019659
Prunus mume
Pm019659
I
0.878
MDP0000836293
Malus domestica
MDP0000836293
N
0.877
Pm018445
Prunus mume
Pm018445
N
0.876
orange1.1g040419m.g
Citrus sinensis
orange1.1g040419m.g
N
0.876
Solyc03g080090.2
Solanum lycopersicum
Solyc03g080090.2
I
0.874
PRUPE_ppa022384mg
Prunus persica
PRUPE_ppa022384mg
I
0.873