CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000206868
(
Malus domestica
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
MDP0000206868
T298444_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC101
M07241_2.00
Arabidopsis thaliana
TGCKTVNDNHNYAMG
CKTRNDNHNBAMGCA
Dap-seq
OMalley et al.(2016)
VND6_colamp_a
0.892
0.324
NAC101
M07242_2.00
Arabidopsis thaliana
TTGCKTVHDNNNYAMGYHWHN
NDWDRCKTRNNNHDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND6_col_v31
0.892
0.324
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000206868
NAC/NAM
8
143
PVGYKCHPRDEELVGYYLYNKVRGTPFRDENVIPEIDPYGSMEARDIWNNNGEQNLEKDEDLYFFTKLKPAKGTGSRVARTIGSGTWKGETAGAKVKDPKTKETIGFFKSHITYYCDSEVINQYDIPQQQEHATAT
Links
Other
NAC/NAM
family TFs
Other
Malus domestica
TFs
72 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000882033
Malus domestica
MDP0000882033
N
0.991
MDP0000285555
Malus domestica
MDP0000285555
I
0.986
PRUPE_ppa015761mg
Prunus persica
PRUPE_ppa015761mg
N
0.964
PRUPE_ppa019675mg
Prunus persica
PRUPE_ppa019675mg
N
0.952
PRUPE_ppa027019mg
Prunus persica
PRUPE_ppa027019mg
N
0.952
PRUPE_ppa023804mg
Prunus persica
PRUPE_ppa023804mg
N
0.951
PRUPE_ppa025596mg
Prunus persica
PRUPE_ppa025596mg
N
0.951
Pm011994
Prunus mume
Pm011994
N
0.950
Pm012091
Prunus mume
Pm012091
N
0.950
PRUPE_ppa025721mg
Prunus persica
PRUPE_ppa025721mg
N
0.943
Pm013492
Prunus mume
Pm013492
N
0.940
Pm003866
Prunus mume
Pm003866
N
0.936
GSMUA_Achr11G16860_001
Musa acuminata
GSMUA_Achr11G16860_001
I
0.933
Pm028250
Prunus mume
Pm028250
N
0.932
Pm001409
Prunus mume
Pm001409
N
0.925
Lus10005143.g
Linum usitatissimum
Lus10005143.g
N
0.925
Lus10030175.g
Linum usitatissimum
Lus10030175.g
N
0.925
Pm031134
Prunus mume
Pm031134
N
0.921
BGIOSGA031230
Oryza indica
BGIOSGA031230
I
0.916
OB09G25590
Oryza brachyantha
OB09G25590
I
0.916
OGLUM09G19480
Oryza glumaepatula
OGLUM09G19480
I
0.916
OMERI09G14170
Oryza meridionalis
OMERI09G14170
I
0.916
ONIVA09G20130
Oryza nivara
ONIVA09G20130
I
0.916
ORGLA09G0151800
Oryza glaberrima
ORGLA09G0151800
I
0.916
MTR_8g093790
Medicago truncatula
MTR_8g093790
I
0.915
MLOC_37843
Hordeum vulgare
MLOC_37843
I
0.912
Traes_5BL_8BE382FE3
Triticum aestivum
Traes_5BL_8BE382FE3
I
0.912
Traes_5DL_B69423A67
Triticum aestivum
Traes_5DL_B69423A67
I
0.912
TRIUR3_13805
Triticum urartu
TRIUR3_13805
I
0.912
LPERR09G14720
Leersia perrieri
LPERR09G14720
I
0.911
GLYMA05G32590
Glycine max
GLYMA05G32590
I
0.909
Sb02g032230
Sorghum bicolor
Sb02g032230
I
0.909
Si032702m.g
Setaria italica
Si032702m.g
I
0.907
Pavir.Ba01386
Panicum virgatum
Pavir.Ba01386
I
0.907
Pavir.Bb02626
Panicum virgatum
Pavir.Bb02626
I
0.907
Eucgr.K02303
Eucalyptus grandis
Eucgr.K02303
I
0.905
evm.TU.contig_29561
Carica papaya
evm.TU.contig_29561
I
0.905
BRADI4G37327
Brachypodium distachyon
BRADI4G37327
I
0.900
NAC101
Arabidopsis thaliana
AT5G62380
D
0.892
VND6
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_8001814
I
0.892
Bostr.0568s0569
Boechera stricta
Bostr.0568s0569
I
0.892
Cagra.4003s0027
Capsella grandiflora
Cagra.4003s0027
I
0.892
Carubv10026697m.g
Capsella rubella
Carubv10026697m.g
I
0.892
F775_13961
Aegilops tauschii
F775_13961
I
0.891
Thhalv10012158m.g
Eutrema salsugineum
Thhalv10012158m.g
I
0.891
PRUPE_ppa017765mg
Prunus persica
PRUPE_ppa017765mg
I
0.889
Bra035896
Brassica rapa
Bra035896
I
0.888
VIT_15s0048g02320
Vitis vinifera
VIT_15s0048g02320
I
0.885
SapurV1A.0093s0260
Salix purpurea
SapurV1A.0093s0260
I
0.885
Bo2g164090
Brassica oleracea
Bo2g164090
I
0.884
Bo3g107700
Brassica oleracea
Bo3g107700
I
0.884
Bra029266
Brassica rapa
Bra029266
I
0.884
Thhalv10004488m.g
Eutrema salsugineum
Thhalv10004488m.g
I
0.884
Bra010077
Brassica rapa
Bra010077
I
0.883
VIT_15s0048g02300
Vitis vinifera
VIT_15s0048g02300
N
0.883
SapurV1A.0365s0200
Salix purpurea
SapurV1A.0365s0200
I
0.883
Bo9g014940
Brassica oleracea
Bo9g014940
I
0.882
GSMUA_Achr7G21780_001
Musa acuminata
GSMUA_Achr7G21780_001
I
0.882
e_gw1.164.26.1
Physcomitrella patens
e_gw1.164.26.1
I
0.881
TCM_015535
Theobroma cacao
TCM_015535
I
0.879
Aquca_009_00966
Aquilegia coerulea
Aquca_009_00966
I
0.879
MDP0000772731
Malus domestica
MDP0000772731
N
0.879
MDP0000911336
Malus domestica
MDP0000911336
N
0.879
GSMUA_Achr4G32010_001
Musa acuminata
GSMUA_Achr4G32010_001
I
0.875
Si022714m.g
Setaria italica
Si022714m.g
I
0.875
SapurV1A.0024s0340
Salix purpurea
SapurV1A.0024s0340
I
0.875
Lus10032919.g
Linum usitatissimum
Lus10032919.g
I
0.874
e_gw1.117.35.1
Physcomitrella patens
e_gw1.117.35.1
I
0.872
AMTR_s00017p00255350
Amborella trichopoda
AMTR_s00017p00255350
I
0.871
GSMUA_Achr4G02390_001
Musa acuminata
GSMUA_Achr4G02390_001
I
0.871
ATAF1
Arabidopsis lyrata
scaffold_100066.1
I
0.871
Gorai.004G125900
Gossypium raimondii
Gorai.004G125900
I
0.871