CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000457996
(
Malus domestica
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
MDP0000457996
T298550_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC078
M02372_2.00
Arabidopsis thaliana
NNRCAMGHMANN
NNTKDCKTGYNN
PBM
Weirauch et al.(2014)
pTH7209
0.910
0.805
NAC078
M07226_2.00
Arabidopsis thaliana
TTDCTTGNDNNDCAAG
CTTGHNNHNCAAGHAA
Dap-seq
OMalley et al.(2016)
NAC2_colamp_a
0.910
0.805
NAC078
M07227_2.00
Arabidopsis thaliana
DTTWCTTGNNNNRCAAG
CTTGYNNNNCAAGWAAH
Dap-seq
OMalley et al.(2016)
NAC2_col_v3a
0.910
0.805
NAC078
M11083_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC078_Q2
0.910
0.805
NAC053
M07202_2.00
Arabidopsis thaliana
TTWCTTGNNNVRCAAG
CTTGYBNNNCAAGWAA
Dap-seq
OMalley et al.(2016)
ANAC053_colamp_a
0.894
0.770
NAC053
M07203_2.00
Arabidopsis thaliana
TTWCTTGNNNVRCAAGH
DCTTGYBNNNCAAGWAA
Dap-seq
OMalley et al.(2016)
ANAC053_col
0.894
0.770
NAC053
M11079_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT3G10500_Q2
0.894
0.770
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000457996
NAC/NAM
10
136
APGFRFHPTDEELVWYYLKRKVSGKNFRFDPISVVDIYKTEPWDLPGKSKLKTRDLEWYFFSFLDKKYGNSSRTNRATEKGYWKTTGKDRPIKHNSRDVGMKKTLVFHSGRAPTGARTNWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Malus domestica
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000695714
Malus domestica
MDP0000695714
I
0.974
PRUPE_ppa003239mg
Prunus persica
PRUPE_ppa003239mg
I
0.971
Pm017550
Prunus mume
Pm017550
I
0.971
Cla020837
Citrullus lanatus
Cla020837
I
0.962
Cucsa.308770
Cucumis sativus
Cucsa.308770
I
0.962
PK11467.1
Cannabis sativa
PK11467.1
I
0.961
cassava22911.valid.m1
Manihot esculenta
cassava22911.valid.m1
I
0.957
Cla013942
Citrullus lanatus
Cla013942
I
0.950
Cucsa.186150
Cucumis sativus
Cucsa.186150
I
0.949
Ciclev10031147m.g
Citrus clementina
Ciclev10031147m.g
I
0.945
orange1.1g007598m.g
Citrus sinensis
orange1.1g007598m.g
I
0.945
28872.m000248
Ricinus communis
28872.m000248
I
0.944
POPTR_0008s03170
Populus trichocarpa
POPTR_0008s03170
I
0.935
POPTR_0010s23650
Populus trichocarpa
POPTR_0010s23650
I
0.935
SapurV1A.0213s0330
Salix purpurea
SapurV1A.0213s0330
I
0.935
Lus10017458.g
Linum usitatissimum
Lus10017458.g
I
0.928
Lus10028824.g
Linum usitatissimum
Lus10028824.g
N
0.923
Cagra.9217s0021
Capsella grandiflora
Cagra.9217s0021
I
0.918
chr5.CM0909.760.nc
Lotus japonicus
chr5.CM0909.760.nc
N
0.913
NAC078
Arabidopsis thaliana
AT5G04410
D
0.910
Bo9g180050
Brassica oleracea
Bo9g180050
I
0.910
NAC2
Arabidopsis lyrata
scaffold_600382.1
I
0.910
Bostr.2128s0007
Boechera stricta
Bostr.2128s0007
I
0.910
Bra009456
Brassica rapa
Bra009456
I
0.909
TCM_043360
Theobroma cacao
TCM_043360
I
0.909
Bra028790
Brassica rapa
Bra028790
I
0.908
GLYMA20G33390
Glycine max
GLYMA20G33390
N
0.906
Thhalv10013110m.g
Eutrema salsugineum
Thhalv10013110m.g
I
0.904
Bra005804
Brassica rapa
Bra005804
I
0.903
Bo3g002800
Brassica oleracea
Bo3g002800
I
0.901
Bo1g143830
Brassica oleracea
Bo1g143830
I
0.898
Bra034120
Brassica rapa
Bra034120
I
0.898
SapurV1A.0394s0050
Salix purpurea
SapurV1A.0394s0050
I
0.895
NAC053
Arabidopsis thaliana
AT3G10500
D
0.894
anac053
Arabidopsis lyrata
fgenesh2_kg.3__1085__AT3G10500.1
I
0.894
Bostr.22252s0010
Boechera stricta
Bostr.22252s0010
I
0.894
Cucsa.308760
Cucumis sativus
Cucsa.308760
I
0.893
Cagra.0834s0027
Capsella grandiflora
Cagra.0834s0027
I
0.892
Carubv10013370m.g
Capsella rubella
Carubv10013370m.g
I
0.892
Thhalv10020438m.g
Eutrema salsugineum
Thhalv10020438m.g
I
0.892
Cla020838
Citrullus lanatus
Cla020838
I
0.891
Aquca_030_00013
Aquilegia coerulea
Aquca_030_00013
I
0.890
GLYMA10G34130
Glycine max
GLYMA10G34130
I
0.888
GLYMA20G33430
Glycine max
GLYMA20G33430
I
0.888
Ca_08371
Cicer arietinum
Ca_08371
I
0.886
chr5.CM0909.750.nc
Lotus japonicus
chr5.CM0909.750.nc
I
0.884
MTR_1g090720
Medicago truncatula
MTR_1g090720
I
0.880