CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Ba02036
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.Ba02036
T298768_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ba02036.1.p
NAC/NAM
10
142
PIGFRFKPKEDELVDYYLLPRLQGRPAVPNGCVVEANVYACHPETLINEHRGAGRQEEWYFVSPRARMYGNGVRPARKSRDGRGRWKASTATKEVAQVVVRNGVKFCKSVLNYFEGNPKKETRTKWIMLEITV
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Bb02323
Panicum virgatum
Pavir.Bb02323
N
0.995
Si032881m.g
Setaria italica
Si032881m.g
N
0.983
Sb02g026510
Sorghum bicolor
Sb02g026510
I
0.964
F775_00438
Aegilops tauschii
F775_00438
N
0.941
Sb06g024980
Sorghum bicolor
Sb06g024980
N
0.937
LPERR04G17350
Leersia perrieri
LPERR04G17350
I
0.932
OPUNC04G19000
Oryza punctata
OPUNC04G19000
N
0.928
Si010053m.g
Setaria italica
Si010053m.g
N
0.919
SELMODRAFT_71307
Selaginella moellendorffii
SELMODRAFT_71307
I
0.912
SELMODRAFT_86855
Selaginella moellendorffii
SELMODRAFT_86855
I
0.912
Pavir.Gb01143
Panicum virgatum
Pavir.Gb01143
N
0.911
Pavir.Gb01092
Panicum virgatum
Pavir.Gb01092
N
0.901
Pavir.Db00380
Panicum virgatum
Pavir.Db00380
N
0.896
BRADI2G60620
Brachypodium distachyon
BRADI2G60620
N
0.885
BRADI2G03467
Brachypodium distachyon
BRADI2G03467
I
0.876
GSMUA_Achr7G23250_001
Musa acuminata
GSMUA_Achr7G23250_001
I
0.873
Pavir.J04049
Panicum virgatum
Pavir.J04049
I
0.871