Pavir.Eb00976 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.Eb00976 T298832_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC087
M07232_2.00 		Arabidopsis thaliana
TDNCKTSHNNNDYACGYHANB
VNTDRCGTRHNNNDSAMGNHA		 Dap-seq
OMalley et al.(2016)
ANAC087_colamp_a 		0.894 0.702
ANAC087
M07233_2.00 		Arabidopsis thaliana
TWNCKTGWNNNDCAMGYHA
TDRCKTGHNNNWCAMGNWA		 Dap-seq
OMalley et al.(2016)
ANAC087_col_v3a 		0.894 0.702
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Eb00976.1.p NAC/NAM 21 151

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sakowv30044157m.g Saccoglossus kowalevskii Sakowv30044157m.g N