CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J27766
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.J27766
T298997_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J27766.1.p
NAC/NAM
8
124
PPGFHFFPSDEDLVIHFLSRKAANLPCRPDIIPTVLLQHYSPWELNGTALQAGNQWYFFSHAAQSRISPNGYWSPIGADETVTSSGCVVGLKKTLIFCTGEPSKGFKTNWIMHEYHF
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Aa01694
Panicum virgatum
Pavir.Aa01694
N
0.973
Pavir.Ab01921
Panicum virgatum
Pavir.Ab01921
N
0.973
Si018368m.g
Setaria italica
Si018368m.g
N
0.959
Sb04g022672
Sorghum bicolor
Sb04g022672
N
0.952
OB04G20560
Oryza brachyantha
OB04G20560
N
0.935
LPERR04G10110
Leersia perrieri
LPERR04G10110
N
0.920
GRMZM2G094067
Zea mays
GRMZM2G094067
N
0.918
Sb06g017190
Sorghum bicolor
Sb06g017190
N
0.911
LPERR02G16450
Leersia perrieri
LPERR02G16450
N
0.892
Pavir.Ga01785
Panicum virgatum
Pavir.Ga01785
N
0.886
Pavir.J14631
Panicum virgatum
Pavir.J14631
N
0.886
OPUNC04G11290
Oryza punctata
OPUNC04G11290
N
0.881
OPUNC02G18340
Oryza punctata
OPUNC02G18340
N
0.879
BGIOSGA008422
Oryza indica
BGIOSGA008422
N
0.878
OGLUM02G20740
Oryza glumaepatula
OGLUM02G20740
N
0.878
OLONG_024951
Oryza longistaminata
OLONG_024951
N
0.878
ONIVA02G22460
Oryza nivara
ONIVA02G22460
N
0.878
ORUFI02G21510
Oryza rufipogon
ORUFI02G21510
N
0.878
OS02G0555300
Oryza sativa
OS02G0555300
N
0.878
F775_28453
Aegilops tauschii
F775_28453
N
0.877
MLOC_15681
Hordeum vulgare
MLOC_15681
N
0.877
OB02G27960
Oryza brachyantha
OB02G27960
N
0.877
Traes_2AL_8A23618BA
Triticum aestivum
Traes_2AL_8A23618BA
N
0.877
Traes_2BL_F4302657F
Triticum aestivum
Traes_2BL_F4302657F
N
0.877
Traes_2DL_61C443C56
Triticum aestivum
Traes_2DL_61C443C56
N
0.877
OBART02G20450
Oryza barthii
OBART02G20450
N
0.871
ORGLA02G0175400
Oryza glaberrima
ORGLA02G0175400
N
0.871