CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J38743
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.J38743
T299018_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J38743.1.p
NAC/NAM
10
146
PPAFDSHPSDVVLVKSYLRPWVAQGVRPAGAFVHAADLYAAEPGELARRFRAAVARDGERAWYFLSPLRTKSPRGRRKARTVAGGAGWWHGEAGPRPVLDPLDGRRMVGYRQSFSFMRRGADGAPVRTGWIMLELRL
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si032755m.g
Setaria italica
Si032755m.g
N
0.995
Pavir.J21487
Panicum virgatum
Pavir.J21487
N
0.993
Si001850m.g
Setaria italica
Si001850m.g
I
0.960
GRMZM2G163843
Zea mays
GRMZM2G163843
N
0.947
Pavir.J25882
Panicum virgatum
Pavir.J25882
N
0.939
Pavir.J36802
Panicum virgatum
Pavir.J36802
N
0.936
GRMZM2G122615
Zea mays
GRMZM2G122615
N
0.907