CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10020717m.g
(
Eutrema salsugineum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Thhalv10020717m.g
T299275_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC050
M07200_2.00
Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG
Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a
0.968
0.991
ANAC050
M07201_2.00
Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG
Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a
0.968
0.991
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10020717m
NAC/NAM
27
153
APGFRFHPTDEELVSYYLKRKVLSKPVRFDAIGEVDIYKHEPWDLAVFSRLKTRDQEWYFFSALDKKYGNGARMNRATNKGYWKATGKDREIRRDIQLLGMKKTLVFHSGRAPDGLRTNWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Eutrema salsugineum
TFs
92 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_27564
Aegilops tauschii
F775_27564
I
0.895
ANAC052
Arabidopsis lyrata
fgenesh2_kg.3__1083__AT3G10490.2
I
0.968
ANAC050
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_3000864
I
0.968
ANAC052
Arabidopsis thaliana
AT3G10490
I
0.956
ANAC050
Arabidopsis thaliana
AT3G10480
D
0.968
Bostr.22252s0012
Boechera stricta
Bostr.22252s0012
I
0.968
Bostr.22252s0011
Boechera stricta
Bostr.22252s0011
I
0.968
BRADI3G56080
Brachypodium distachyon
BRADI3G56080
I
0.884
BRADI3G12470
Brachypodium distachyon
BRADI3G12470
I
0.895
Bo1g143840
Brassica oleracea
Bo1g143840
I
0.957
Bo1g143850
Brassica oleracea
Bo1g143850
I
0.950
Bo3g062700
Brassica oleracea
Bo3g062700
I
0.930
Bo3g062710
Brassica oleracea
Bo3g062710
I
0.931
Bo5g137360
Brassica oleracea
Bo5g137360
I
0.957
Bra034119
Brassica rapa
Bra034119
I
0.957
Bra034118
Brassica rapa
Bra034118
I
0.950
Bra029844
Brassica rapa
Bra029844
I
0.957
Bra001366
Brassica rapa
Bra001366
I
0.941
Bra001365
Brassica rapa
Bra001365
I
0.930
PK06477.1
Cannabis sativa
PK06477.1
I
0.908
Cagra.0834s0028
Capsella grandiflora
Cagra.0834s0028
I
0.969
Cagra.0834s0029
Capsella grandiflora
Cagra.0834s0029
I
0.968
Cagra.9217s0020
Capsella grandiflora
Cagra.9217s0020
I
0.911
Carubv10003768m.g
Capsella rubella
Carubv10003768m.g
I
0.901
Carubv10013564m.g
Capsella rubella
Carubv10013564m.g
I
0.969
Carubv10013694m.g
Capsella rubella
Carubv10013694m.g
I
0.968
Ca_08371
Cicer arietinum
Ca_08371
I
0.913
Cla020838
Citrullus lanatus
Cla020838
I
0.904
Ciclev10031606m.g
Citrus clementina
Ciclev10031606m.g
I
0.951
orange1.1g014130m.g
Citrus sinensis
orange1.1g014130m.g
I
0.951
Cucsa.308760
Cucumis sativus
Cucsa.308760
I
0.902
Thhalv10020745m.g
Eutrema salsugineum
Thhalv10020745m.g
I
0.969
gene23561-v1.0-hybrid
Fragaria vesca
gene23561-v1.0-hybrid
I
0.880
GLYMA20G33430
Glycine max
GLYMA20G33430
I
0.913
GLYMA10G34130
Glycine max
GLYMA10G34130
I
0.913
Gorai.012G007000
Gossypium raimondii
Gorai.012G007000
I
0.948
Gorai.011G234200
Gossypium raimondii
Gorai.011G234200
I
0.925
Gorai.009G309300
Gossypium raimondii
Gorai.009G309300
I
0.949
LPERR08G20450
Leersia perrieri
LPERR08G20450
I
0.889
Lus10023537.g
Linum usitatissimum
Lus10023537.g
I
0.915
Lus10037939.g
Linum usitatissimum
Lus10037939.g
I
0.945
Lus10038670.g
Linum usitatissimum
Lus10038670.g
I
0.945
chr5.CM0909.750.nc
Lotus japonicus
chr5.CM0909.750.nc
I
0.911
MDP0000437676
Malus domestica
MDP0000437676
I
0.902
MDP0000258167
Malus domestica
MDP0000258167
I
0.897
cassava22912.valid.m1
Manihot esculenta
cassava22912.valid.m1
I
0.945
MTR_1g090720
Medicago truncatula
MTR_1g090720
I
0.911
mgf004743m
Mimulus guttatus
mgf004743m
I
0.881
mgf000623m
Mimulus guttatus
mgf000623m
I
0.896
OBART02G37700
Oryza barthii
OBART02G37700
I
0.871
OBART08G23760
Oryza barthii
OBART08G23760
I
0.885
OB02G44540
Oryza brachyantha
OB02G44540
I
0.871
OB08G30590
Oryza brachyantha
OB08G30590
I
0.893
ORGLA02G0329400
Oryza glaberrima
ORGLA02G0329400
I
0.871
ORGLA08G0191600
Oryza glaberrima
ORGLA08G0191600
I
0.885
OGLUM02G38880
Oryza glumaepatula
OGLUM02G38880
I
0.871
OGLUM08G25240
Oryza glumaepatula
OGLUM08G25240
I
0.885
BGIOSGA009316
Oryza indica
BGIOSGA009316
I
0.871
BGIOSGA026481
Oryza indica
BGIOSGA026481
I
0.885
OLONG_023179
Oryza longistaminata
OLONG_023179
I
0.885
OMERI08G18580
Oryza meridionalis
OMERI08G18580
I
0.885
ONIVA08G26810
Oryza nivara
ONIVA08G26810
I
0.885
ONIVA02G40500
Oryza nivara
ONIVA02G40500
I
0.871
OPUNC08G21700
Oryza punctata
OPUNC08G21700
I
0.885
OPUNC02G34910
Oryza punctata
OPUNC02G34910
I
0.871
ORUFI08G26250
Oryza rufipogon
ORUFI08G26250
I
0.885
ORUFI02G39260
Oryza rufipogon
ORUFI02G39260
I
0.871
OS08G0562200
Oryza sativa
OS08G0562200
I
0.885
OS02G0822400
Oryza sativa
OS02G0822400
I
0.871
Pavir.Aa00085
Panicum virgatum
Pavir.Aa00085
I
0.882
Pavir.Ab03009
Panicum virgatum
Pavir.Ab03009
I
0.880
Pavir.Fb02407
Panicum virgatum
Pavir.Fb02407
I
0.897
Pavir.Fa00048
Panicum virgatum
Pavir.Fa00048
I
0.897
POPTR_0010s23630
Populus trichocarpa
POPTR_0010s23630
I
0.941
Pm017547
Prunus mume
Pm017547
I
0.894
SapurV1A.0213s0310
Salix purpurea
SapurV1A.0213s0310
I
0.940
Si013361m.g
Setaria italica
Si013361m.g
I
0.895
Si016620m.g
Setaria italica
Si016620m.g
I
0.881
Solyc05g055480.2
Solanum lycopersicum
Solyc05g055480.2
I
0.901
Solyc05g055470.2
Solanum lycopersicum
Solyc05g055470.2
I
0.893
PGSC0003DMG402023373
Solanum tuberosum
PGSC0003DMG402023373
I
0.889
PGSC0003DMG401023373
Solanum tuberosum
PGSC0003DMG401023373
I
0.902
Sb07g023900
Sorghum bicolor
Sb07g023900
I
0.897
Sb04g037720
Sorghum bicolor
Sb04g037720
I
0.880
TCM_043357
Theobroma cacao
TCM_043357
I
0.942
Traes_6AL_8BA1FF8B2
Triticum aestivum
Traes_6AL_8BA1FF8B2
I
0.884
Traes_7BL_FB5FAC1E8
Triticum aestivum
Traes_7BL_FB5FAC1E8
I
0.895
Traes_7DS_9FBF54244
Triticum aestivum
Traes_7DS_9FBF54244
I
0.895
TRIUR3_33524
Triticum urartu
TRIUR3_33524
I
0.895
VIT_13s0019g05230
Vitis vinifera
VIT_13s0019g05230
I
0.907
VIT_13s0019g05240
Vitis vinifera
VIT_13s0019g05240
I
0.904
GRMZM2G113950
Zea mays
GRMZM2G113950
I
0.880