CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000239523
(
Malus domestica
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01422 (zf-NF-X1)
IPR000967
MDP0000239523
T300978_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000239523
NFX
179
196
CGHHCLLLCHPGPCPSCP
MDP0000239523
NFX
231
249
CGIHRCSEICHQGPCLPCR
MDP0000239523
NFX
285
303
CGQHKCTKGCHLGECGPCP
MDP0000239523
NFX
339
358
CGYHRCPERCHRGECIETCR
MDP0000239523
NFX
392
410
CGRHACKRRCCDGDCPPCS
MDP0000239523
NFX
457
469
PHKCHYGACHPCR
MDP0000239523
NFX
478
489
CGHNCKLRCHGP
MDP0000239523
NFX
586
603
CPHPCPLPCHPGDCPPCK
MDP0000239523
NFX
649
669
CTHLCPEICHPGQCSSPEKCS
Links
Other
NFX
family TFs
Other
Malus domestica
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene20971-v1.0-hybrid
Fragaria vesca
gene20971-v1.0-hybrid
N
0.735