CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN10661
(
Caenorhabditis brenneri
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBN10661
T301731_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hr83
M06434_2.00
Drosophila melanogaster
RAAGTCANHVWVGM
KCBWBDNTGACTTY
B1H
Zhu et al.(2011)
Hr83_SANGER_5_FBgn0037436
0.770
0.614
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN10661
Nuclear receptor
9
79
VICEICGDKSYGRHYGVWACDGCSCFFKRSVRKNIMYTCIAGNWRCVVDKGRRNWCPACRLAKCTKLKMNR
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis brenneri
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR02G03890
Leersia perrieri
LPERR02G03890
N
Si018290m.g
Setaria italica
Si018290m.g
N