CRE00809 (Caenorhabditis remanei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CRE00809 T302038_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN

NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.929 0.571
nhr-1
M00686_2.00
Caenorhabditis elegans
ARTGATCA

TGATCAYT
PBM
Narasimhan et al.(2015)
pTH9322
0.882 0.471
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE00809 Nuclear receptor 19 88

Links

Other Nuclear receptor family TFs
Other Caenorhabditis remanei TFs

225 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_30082 Aegilops tauschii F775_30082 I
AMTR_s00018p00071850 Amborella trichopoda AMTR_s00018p00071850 I
AMTR_s00018p00074980 Amborella trichopoda AMTR_s00018p00074980 I
Aquca_009_00966 Aquilegia coerulea Aquca_009_00966 I
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I
NAC69 Arabidopsis thaliana AT4G01550 D
Bostr.0556s0555 Boechera stricta Bostr.0556s0555 I
Bostr.25375s0002 Boechera stricta Bostr.25375s0002 I
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I
BRADI1G52480 Brachypodium distachyon BRADI1G52480 N
BRADI3G16480 Brachypodium distachyon BRADI3G16480 I
BRADI4G34022 Brachypodium distachyon BRADI4G34022 I
Bo5g002850 Brassica oleracea Bo5g002850 I
Bo5g002860 Brassica oleracea Bo5g002860 N
Bo9g004070 Brassica oleracea Bo9g004070 I
Bra008553 Brassica rapa Bra008553 I
Bra033296 Brassica rapa Bra033296 I
Bra036328 Brassica rapa Bra036328 I
Cagra.1968s0045 Capsella grandiflora Cagra.1968s0045 I
Carubv10003260m.g Capsella rubella Carubv10003260m.g I
Carubv10009049m.g Capsella rubella Carubv10009049m.g I
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I
evm.TU.supercontig_3.170 Carica papaya evm.TU.supercontig_3.170 N
Ca_04069 Cicer arietinum Ca_04069 I
Ca_20988 Cicer arietinum Ca_20988 I
Ca_27204 Cicer arietinum Ca_27204 I
Cla002432 Citrullus lanatus Cla002432 N
Cucsa.273280 Cucumis sativus Cucsa.273280 N
Eucgr.G01067 Eucalyptus grandis Eucgr.G01067 N
Eucgr.G01548 Eucalyptus grandis Eucgr.G01548 N
Eucgr.G01550 Eucalyptus grandis Eucgr.G01550 N
Eucgr.I02571 Eucalyptus grandis Eucgr.I02571 N
Eucgr.J00531 Eucalyptus grandis Eucgr.J00531 I
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I
Thhalv10007665m.g Eutrema salsugineum Thhalv10007665m.g I
gene08448-v1.0-hybrid Fragaria vesca gene08448-v1.0-hybrid I
GLYMA12G31211 Glycine max GLYMA12G31211 I
GLYMA14G36840 Glycine max GLYMA14G36840 I
Gorai.004G125900 Gossypium raimondii Gorai.004G125900 I
Gorai.006G203800 Gossypium raimondii Gorai.006G203800 I
Gorai.007G017500 Gossypium raimondii Gorai.007G017500 I
Gorai.009G083500 Gossypium raimondii Gorai.009G083500 N
MLOC_37843 Hordeum vulgare MLOC_37843 I
MLOC_50406 Hordeum vulgare MLOC_50406 I
MLOC_75297 Hordeum vulgare MLOC_75297 N
LPERR08G03510 Leersia perrieri LPERR08G03510 I
Lus10015587.g Linum usitatissimum Lus10015587.g I
chr1.LjT41E18.160.nc Lotus japonicus chr1.LjT41E18.160.nc I
MDP0000206868 Malus domestica MDP0000206868 I
MDP0000282616 Malus domestica MDP0000282616 I
MDP0000907489 Malus domestica MDP0000907489 N
cassava11768.valid.m1 Manihot esculenta cassava11768.valid.m1 N
MTR_3g093050 Medicago truncatula MTR_3g093050 I
MTR_5g069030 Medicago truncatula MTR_5g069030 I
MTR_8g023840 Medicago truncatula MTR_8g023840 I
MTR_8g023860 Medicago truncatula MTR_8g023860 I
MTR_8g023880 Medicago truncatula MTR_8g023880 N
MTR_8g023930 Medicago truncatula MTR_8g023930 I
mgf015836m Mimulus guttatus mgf015836m I
mgf022344m Mimulus guttatus mgf022344m I
GSMUA_Achr11G16860_001 Musa acuminata GSMUA_Achr11G16860_001 I
GSMUA_Achr1G03560_001 Musa acuminata GSMUA_Achr1G03560_001 I
GSMUA_Achr2G11810_001 Musa acuminata GSMUA_Achr2G11810_001 I
GSMUA_Achr3G00330_001 Musa acuminata GSMUA_Achr3G00330_001 I
GSMUA_Achr4G29170_001 Musa acuminata GSMUA_Achr4G29170_001 I
GSMUA_AchrUn_randomG04060_001 Musa acuminata GSMUA_AchrUn_randomG04060_001 I
OBART06G00060 Oryza barthii OBART06G00060 N
OBART08G03460 Oryza barthii OBART08G03460 I
OB08G13730 Oryza brachyantha OB08G13730 I
ORGLA06G0000500 Oryza glaberrima ORGLA06G0000500 N
ORGLA08G0029000 Oryza glaberrima ORGLA08G0029000 I
OGLUM06G00040 Oryza glumaepatula OGLUM06G00040 N
OGLUM08G03540 Oryza glumaepatula OGLUM08G03540 I
BGIOSGA022116 Oryza indica BGIOSGA022116 N
BGIOSGA027623 Oryza indica BGIOSGA027623 I
OLONG_000105 Oryza longistaminata OLONG_000105 I
OLONG_004904 Oryza longistaminata OLONG_004904 N
OMERI06G00050 Oryza meridionalis OMERI06G00050 N
OMERI08G03500 Oryza meridionalis OMERI08G03500 I
ONIVA06G00080 Oryza nivara ONIVA06G00080 N
ONIVA08G03440 Oryza nivara ONIVA08G03440 I
OPUNC06G00030 Oryza punctata OPUNC06G00030 N
OPUNC08G03310 Oryza punctata OPUNC08G03310 I
ORUFI06G00070 Oryza rufipogon ORUFI06G00070 N
ORUFI08G03870 Oryza rufipogon ORUFI08G03870 I
OS06G0101800 Oryza sativa OS06G0101800 N
OS08G0157900 Oryza sativa OS08G0157900 I
Pavir.Fa01901 Panicum virgatum Pavir.Fa01901 I
Pavir.Fb00405 Panicum virgatum Pavir.Fb00405 I
POPTR_0002s15560 Populus trichocarpa POPTR_0002s15560 I
POPTR_0002s18290 Populus trichocarpa POPTR_0002s18290 I
POPTR_0002s18310 Populus trichocarpa POPTR_0002s18310 I
POPTR_0002s18320 Populus trichocarpa POPTR_0002s18320 I
POPTR_0012s00760 Populus trichocarpa POPTR_0012s00760 N
POPTR_0014s10330 Populus trichocarpa POPTR_0014s10330 I
POPTR_0014s10350 Populus trichocarpa POPTR_0014s10350 I
POPTR_0014s10360 Populus trichocarpa POPTR_0014s10360 I
POPTR_0015s00640 Populus trichocarpa POPTR_0015s00640 N
Pm019659 Prunus mume Pm019659 I
Pm028711 Prunus mume Pm028711 I
Pm028712 Prunus mume Pm028712 N
PRUPE_ppa016876mg Prunus persica PRUPE_ppa016876mg N
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I
PRUPE_ppa022384mg Prunus persica PRUPE_ppa022384mg I
PRUPE_ppb017658mg Prunus persica PRUPE_ppb017658mg I
29764.m000758 Ricinus communis 29764.m000758 N
SapurV1A.0024s0340 Salix purpurea SapurV1A.0024s0340 I
SapurV1A.0162s0450 Salix purpurea SapurV1A.0162s0450 I
SapurV1A.0326s0320 Salix purpurea SapurV1A.0326s0320 N
SapurV1A.0586s0170 Salix purpurea SapurV1A.0586s0170 I
Si006105m.g Setaria italica Si006105m.g N
Si013369m.g Setaria italica Si013369m.g I
Solyc03g080090.2 Solanum lycopersicum Solyc03g080090.2 I
Solyc06g073050.2 Solanum lycopersicum Solyc06g073050.2 N
Solyc06g074170.2 Solanum lycopersicum Solyc06g074170.2 I
Solyc11g068750.1 Solanum lycopersicum Solyc11g068750.1 I
PGSC0003DMG400000555 Solanum tuberosum PGSC0003DMG400000555 I
PGSC0003DMG400005892 Solanum tuberosum PGSC0003DMG400005892 I
PGSC0003DMG400019615 Solanum tuberosum PGSC0003DMG400019615 I
PGSC0003DMG402027023 Solanum tuberosum PGSC0003DMG402027023 N
Sb07g003900 Sorghum bicolor Sb07g003900 I
Sb10g000101 Sorghum bicolor Sb10g000101 N
TCM_015535 Theobroma cacao TCM_015535 I
TCM_041332 Theobroma cacao TCM_041332 N
Traes_4AL_22CE41C6F Triticum aestivum Traes_4AL_22CE41C6F N
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I
Traes_7AL_669D4AE47 Triticum aestivum Traes_7AL_669D4AE47 I
Traes_7BL_0C386426A Triticum aestivum Traes_7BL_0C386426A I
Traes_7DL_AB67A0B36 Triticum aestivum Traes_7DL_AB67A0B36 I
TRIUR3_13805 Triticum urartu TRIUR3_13805 I
TRIUR3_32613 Triticum urartu TRIUR3_32613 I
VIT_15s0048g02280 Vitis vinifera VIT_15s0048g02280 N
VIT_15s0048g02300 Vitis vinifera VIT_15s0048g02300 N
VIT_15s0048g02320 Vitis vinifera VIT_15s0048g02320 I
GRMZM2G003715 Zea mays GRMZM2G003715 I
GRMZM2G163914 Zea mays GRMZM2G163914 N
GRMZM2G459156 Zea mays GRMZM2G459156 N